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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123080846   gamma-secretase subunit APH1-like 
 osa-u.5   4328988   gamma-secretase subunit APH1-like 
 zma-u.5   100283316   gamma-secretase subunit APH-1B 
 ath-u.5   AT2G31440   gamma-secretase subunit APH1-like protein 
 gma-u.5   100794637   gamma-secretase subunit APH1-like 
 gma-u.5   100783660   gamma-secretase subunit APH1-like 
 sly-u.5   101249370   gamma-secretase subunit APH1-like 
 vvi-u.5   100252610   gamma-secretase subunit APH1-like 
 ppo-u.5   7469595   gamma-secretase subunit APH1-like 
 mtr-u.5   25492650   gamma-secretase subunit APH1-like 

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Top 50 coexpressed genes to 123080846 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123080846 (tae-r.2 coexpression data)

CoexMap"123080846"


taeLOC123080846 | Entrez gene ID : 123080846    
Species tae osa zma ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra sbi nta bna
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043085 [list] [network] positive regulation of catalytic activity  (138 genes)  IEA  
GO:0016485 [list] [network] protein processing  (173 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (10843 genes)  IEA  
GO MF
Protein XP_044359728.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 1,  cyto 1,  plas 1,  extr 1,  vacu 1,  golg 1,  cyto_mito 1,  golg_plas 1,  cyto_plas 1  (predict for XP_044359728.1)
Subcellular
localization
TargetP
scret 5,  other 3  (predict for XP_044359728.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123080846

.
osa-u.5
for
4328988

.
zma-u.5
for
100283316

.
ath-u.5
for
AT2G31440

.
gma-u.5
for
100794637

.
gma-u.5
for
100783660

.
sly-u.5
for
101249370

.
vvi-u.5
for
100252610

.
ppo-u.5
for
7469595

.
mtr-u.5
for
25492650

.


Ortholog ID: 7526
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G31440 LOC100794637 LOC100783660 LOC101249370 LOC4328988 LOC100283316 LOC103844423 LOC103857373 LOC100252610 LOC7469595 LOC25492650 LOC123080846 LOC123072662 LOC123445598 LOC123445424 LOC107927326 LOC107934811 LOC111201285 LOC111201366 CHLRE_13g576300v5 LOC8059094 LOC102593469 LOC102617940 LOC100838492 LOC107792930 LOC107832141
Function* gamma-secretase subunit APH1-like protein gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH-1B gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like uncharacterized protein gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00510 N-Glycan biosynthesis 2
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot04142 Lysosome 3
sot05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit03060 Protein export 3
cit04145 Phagosome 3
cit00190 Oxidative phosphorylation 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 3
nta00730 Thiamine metabolism 2
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817702 100794637 100783660 101249370 4328988 100283316 103844423 103857373 100252610 7469595 25492650 123080846 123072662 123445598 123445424 107927326 107934811 111201285 111201366 5719239 8059094 102593469 102617940 100838492 107792930 107832141
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