ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4331384	uncharacterized LOC4331384
zma-u.5	100282726	RNA binding protein
ath-u.5	AT2G40780	Nucleic acid-binding, OB-fold-like protein
gma-u.5	100306612	uncharacterized LOC100306612
sly-u.5	101267408	uncharacterized LOC101267408
vvi-u.5	100248727	uncharacterized LOC100248727
ppo-u.5	18108343	uncharacterized LOC18108343
mtr-u.5	25489815	probable RNA-binding protein EIF1AD

functional annotation

KEGG

GO BP

GO:0006413 [list] [network] translational initiation

(158 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(8281 genes)

IEA

GO MF

GO:0003743 [list] [network] translation initiation factor activity	(201 genes)	IEA
GO:0003723 [list] [network] RNA binding	(4004 genes)	IEA

Protein

XP_044367619.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 1, plas 1

(predict for XP_044367619.1)

Subcellular
localization
TargetP

other 7

(predict for XP_044367619.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4331384	zma-u.5 for 100282726	ath-u.5 for AT2G40780	gma-u.5 for 100306612	sly-u.5 for 101267408	vvi-u.5 for 100248727	ppo-u.5 for 18108343	mtr-u.5 for 25489815

Ortholog ID: 5971

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

probable RNA-binding protein EIF1AD

uncharacterized LOC4331384

RNA binding protein

probable RNA-binding protein EIF1AD

Nucleic acid-binding, OB-fold-like protein

uncharacterized LOC100306612

uncharacterized LOC101267408

probable RNA-binding protein EIF1AD

uncharacterized LOC100248727

uncharacterized LOC18108343

probable RNA-binding protein EIF1AD

uncharacterized LOC102630681

uncharacterized LOC107802982

uncharacterized LOC107776914

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	2
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	4
bdi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00510	N-Glycan biosynthesis	3
osa00513	Various types of N-glycan biosynthesis	3
osa04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	3
zma03018	RNA degradation	3
zma03040	Spliceosome	3
zma04141	Protein processing in endoplasmic reticulum	2
zma03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	8
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma04120	Ubiquitin mediated proteolysis	3
gma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	8
bra03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	8
ghi03020	RNA polymerase	2
ghi03420	Nucleotide excision repair	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	8
ghi03020	RNA polymerase	2
ghi03420	Nucleotide excision repair	2
ghi00061	Fatty acid biosynthesis	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna03018	RNA degradation	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4
bna03040	Spliceosome	2
bna03050	Proteasome	2
bna03020	RNA polymerase	2
bna03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	2
cre00240	Pyrimidine metabolism	2
cre01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

123043712

123403505

100828332

4331384

100282726

8059488

818675

100306612

101267408

103865836

100248727

18108343

25489815

107916260

107896569

106347816

106391619

102585241

102583002

102630681

107802982

107776914

5723058

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4331384 (osa-u.5 coexpression data)

Top 50 enrichment test to 4331384 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4331384 (osa-u.5 coexpression data)

Top 50 enrichment test to 4331384 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**