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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123090585   E3 ubiquitin ligase PARAQUAT TOLERANCE 3 
 tae-r.2   123087347   E3 ubiquitin ligase PQT3-like 
 tae-r.2   123095626   E3 ubiquitin ligase PARAQUAT TOLERANCE 3 
 hvu-r.1   123446941   E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like 
 bdi-r.1   100831001   E3 ubiquitin ligase PARAQUAT TOLERANCE 3 
 osa-u.5   4333626   E3 ubiquitin ligase PARAQUAT TOLERANCE 3 
 zma-u.5   100216835   DWNN domain a CCHC-type zinc finger 
 zma-u.5   103626024   E3 ubiquitin ligase PQT3-like 
 sbi-r.1   8057207   E3 ubiquitin ligase PARAQUAT TOLERANCE 3 
 sbi-r.1   8071501   E3 ubiquitin ligase PQT3-like 

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Top 50 coexpressed genes to 123090585 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123090585 (tae-r.2 coexpression data)

CoexMap"123090585"


taeLOC123090585 | Entrez gene ID : 123090585    
Species tae hvu bdi osa zma sbi gma bra sot cre ghi ppo sly cit ath nta mtr bna vvi
Paralog 3 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006397 [list] [network] mRNA processing  (616 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (881 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (1642 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (667 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (11810 genes)  IEA  
Protein XP_044367837.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cysk 1  (predict for XP_044367837.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_044367837.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123090585
tae-r.2
for
123087347
tae-r.2
for
123095626
hvu-r.1
for
123446941
bdi-r.1
for
100831001
osa-u.5
for
4333626
zma-u.5
for
100216835
zma-u.5
for
103626024
sbi-r.1
for
8057207
sbi-r.1
for
8071501


Ortholog ID: 15334
Species tae tae tae hvu bdi osa zma zma sbi sbi
Symbol LOC123090585 LOC123087347 LOC123095626 LOC123446941 LOC100831001 LOC4333626 LOC100216835 LOC103626024 LOC8057207 LOC8071501
Function* E3 ubiquitin ligase PARAQUAT TOLERANCE 3 E3 ubiquitin ligase PQT3-like E3 ubiquitin ligase PARAQUAT TOLERANCE 3 E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like E3 ubiquitin ligase PARAQUAT TOLERANCE 3 E3 ubiquitin ligase PARAQUAT TOLERANCE 3 DWNN domain a CCHC-type zinc finger E3 ubiquitin ligase PQT3-like E3 ubiquitin ligase PARAQUAT TOLERANCE 3 E3 ubiquitin ligase PQT3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 3
tae00053 Ascorbate and aldarate metabolism 2
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01240 Biosynthesis of cofactors 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123090585 123087347 123095626 123446941 100831001 4333626 100216835 103626024 8057207 8071501
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