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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123091319   protein translocase subunit SECA2, chloroplastic 
 osa-u.5   4349987   protein translocase subunit SECA2, chloroplastic 
 osa-u.5   4327279   protein translocase subunit SECA1, chloroplastic 
 zma-u.5   542347   thylakoid assembly 1 
 zma-u.5   103648919   protein translocase subunit SECA2, chloroplastic 
 ath-u.5   AGY1   Albino or Glassy Yellow 1 
 ath-u.5   SECA2   Preprotein translocase SecA family protein 
 gma-u.5   100803415   protein translocase subunit SecA, chloroplastic 
 gma-u.5   100815860   protein translocase subunit SecA, chloroplastic 
 gma-u.5   100793437   protein translocase subunit SECA2, chloroplastic 
 sly-u.5   101256051   protein translocase subunit SECA2, chloroplastic 
 sly-u.5   101250048   protein translocase subunit SECA1, chloroplastic 
 vvi-u.5   100248990   protein translocase subunit SECA2, chloroplastic 
 vvi-u.5   100250268   protein translocase subunit SecA, chloroplastic 
 ppo-u.5   7455389   protein translocase subunit SecA, chloroplastic 
 ppo-u.5   7467860   protein translocase subunit SECA2, chloroplastic 
 mtr-u.5   11407629   protein translocase subunit SecA, chloroplastic 
 mtr-u.5   25489702   protein translocase subunit SECA2, chloroplastic 

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Top 50 coexpressed genes to 123091319 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123091319 (tae-r.2 coexpression data)

CoexMap"123091319"


taeLOC123091319 | Entrez gene ID : 123091319    
Species tae osa zma ath gma sly vvi ppo mtr hvu cit bra ghi sbi bdi nta bna cre sot
Paralog 1 2 2 2 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03060 [list] [network] Protein export (246 genes)
GO BP
GO:0017038 [list] [network] protein import  (8 genes)  IEA  
GO:0006605 [list] [network] protein targeting  (250 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (789 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (283 genes)  IEA  
GO:0016020 [list] [network] membrane  (10843 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
Protein XP_044368733.1 [sequence] [blastp]
XP_044368734.1 [sequence] [blastp]
XP_044368735.1 [sequence] [blastp]
XP_044368736.1 [sequence] [blastp]
XP_044368737.1 [sequence] [blastp]
XP_044368738.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2,  cyto_mito 1  (predict for XP_044368733.1)
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 1  (predict for XP_044368734.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_044368735.1)
cyto 9,  nucl 1,  pero 1  (predict for XP_044368736.1)
cyto 5,  nucl 3,  chlo 2  (predict for XP_044368737.1)
cyto 5,  nucl 3,  chlo 2  (predict for XP_044368738.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044368733.1)
chlo 9  (predict for XP_044368734.1)
chlo 9  (predict for XP_044368735.1)
other 6,  mito 5  (predict for XP_044368736.1)
other 5  (predict for XP_044368737.1)
other 5  (predict for XP_044368738.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123091319
osa-u.5
for
4349987
osa-u.5
for
4327279
zma-u.5
for
542347
zma-u.5
for
103648919
ath-u.5
for
AGY1
ath-u.5
for
SECA2
gma-u.5
for
100803415
gma-u.5
for
100815860
gma-u.5
for
100793437
sly-u.5
for
101256051
sly-u.5
for
101250048
vvi-u.5
for
100248990
vvi-u.5
for
100250268
ppo-u.5
for
7455389
ppo-u.5
for
7467860
mtr-u.5
for
11407629
mtr-u.5
for
25489702


Ortholog ID: 3715
Species tae tae hvu hvu bdi bdi osa osa zma zma sbi sbi ath ath gma gma sly sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot sot cit cit nta nta cre cre
Symbol LOC123086652 LOC123069769 LOC123443566 LOC123447923 LOC100825147 LOC100841935 LOC4349987 LOC4327279 LOC542347 LOC103648919 LOC8074328 LOC8060367 AGY1 SECA2 LOC100803415 LOC100793437 LOC101250048 LOC101256051 LOC103835738 LOC103858803 LOC100250268 LOC100248990 LOC7467860 LOC7455389 LOC11407629 LOC25489702 LOC107945986 LOC107949480 LOC106388784 LOC106425981 LOC102579971 LOC102584946 LOC102630213 LOC102621270 LOC107780874 LOC107789877 CHLRE_12g518000v5 CHLRE_12g517900v5
Function* protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA1, chloroplastic protein translocase subunit SECA1, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA1, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA1, chloroplastic thylakoid assembly 1 protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA1, chloroplastic Albino or Glassy Yellow 1 Preprotein translocase SecA family protein protein translocase subunit SecA, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA1, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA1, chloroplastic protein translocase subunit SecA, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SecA, chloroplastic protein translocase subunit SecA, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SecA, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA1, chloroplastic-like protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA1, chloroplastic protein translocase subunit SecA, chloroplastic protein translocase subunit SECA2, chloroplastic protein translocase subunit SECA1, chloroplastic protein translocase subunit SECA2, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 4
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03040 Spliceosome 2
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi00220 Arginine biosynthesis 2
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 3
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 2
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 2
vvi03018 RNA degradation 2
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna03060 Protein export 2
bna00030 Pentose phosphate pathway 2
bna00040 Pentose and glucuronate interconversions 2
bna00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00240 Pyrimidine metabolism 2
bna01240 Biosynthesis of cofactors 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03060 Protein export 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
nta04820 Cytoskeleton in muscle cells 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 4
cre03060 Protein export 2
cre00970 Aminoacyl-tRNA biosynthesis 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 8
cre00260 Glycine, serine and threonine metabolism 2
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123086652 123069769 123443566 123447923 100825147 100841935 4349987 4327279 542347 103648919 8074328 8060367 827922 838767 100803415 100793437 101250048 101256051 103835738 103858803 100250268 100248990 7467860 7455389 11407629 25489702 107945986 107949480 106388784 106425981 102579971 102584946 102630213 102621270 107780874 107789877 5722632 5722633
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