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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123098214   homocysteine S-methyltransferase 1 
 tae-r.2   123092940   homocysteine S-methyltransferase 1 
 tae-r.2   123070948   homocysteine S-methyltransferase 4 
 tae-r.2   123062208   homocysteine S-methyltransferase 4 
 hvu-r.1   123449286   homocysteine S-methyltransferase 1 
 hvu-r.1   123451848   homocysteine S-methyltransferase 3-like 
 bdi-r.1   100841399   homocysteine S-methyltransferase 1 
 bdi-r.1   100838685   homocysteine S-methyltransferase 4 
 bdi-r.1   100836808   homocysteine S-methyltransferase 3 
 osa-u.5   4332095   homocysteine S-methyltransferase 1 
 osa-u.5   4352747   homocysteine S-methyltransferase 2 
 zma-u.5   541876   homocysteine S-methyltransferase 4 
 zma-u.5   541874   homocysteine S-methyltransferase-2 
 sbi-r.1   8056874   homocysteine S-methyltransferase 1 
 sbi-r.1   8070125   homocysteine S-methyltransferase 3 
 ath-u.5   HMT-1   Homocysteine S-methyltransferase family protein 
 ath-u.5   HMT3   homocysteine S-methyltransferase 3 
 ath-u.5   HMT2   homocysteine methyltransferase 2 
 gma-u.5   100812265   homocysteine S-methyltransferase 1 
 gma-u.5   100811127   homocysteine S-methyltransferase 3-like 
 gma-u.5   100790567   selenocysteine methyltransferase 
 sly-u.5   101251816   homocysteine S-methyltransferase 2 
 sly-u.5   101262954   homocysteine S-methyltransferase 2 
 bra-r.6   103842126   selenocysteine Se-methyltransferase-like 
 bra-r.6   103869013   homocysteine S-methyltransferase 3 
 bra-r.6   103862723   selenocysteine Se-methyltransferase 
 vvi-u.5   100852835   homocysteine S-methyltransferase 2 
 vvi-u.5   100247323   homocysteine S-methyltransferase 1 
 vvi-u.5   100264835   homocysteine S-methyltransferase 3 
 ppo-u.5   7474182   homocysteine S-methyltransferase 3 
 ppo-u.5   7464849   homocysteine S-methyltransferase 2 
 ppo-u.5   7466898   homocysteine S-methyltransferase 1 
 mtr-u.5   25485172   homocysteine S-methyltransferase 3 
 mtr-u.5   11422561   homocysteine S-methyltransferase 1 
 mtr-u.5   25499146   selenocysteine methyltransferase 
 ghi-r.1   107927633   homocysteine S-methyltransferase 3 
 ghi-r.1   107951360   homocysteine S-methyltransferase 2 
 ghi-r.1   107914791   homocysteine S-methyltransferase 2 
 bna-r.1   106415841   homocysteine S-methyltransferase 2 
 bna-r.1   106349415   homocysteine S-methyltransferase 1 
 sot-r.1   102595885   homocysteine S-methyltransferase 2 
 sot-r.1   102595383   homocysteine S-methyltransferase 2-like 
 cit-r.1   102628438   selenocysteine methyltransferase 
 cit-r.1   102614076   homocysteine S-methyltransferase 1 
 cit-r.1   102618286   homocysteine S-methyltransferase 3 
 nta-r.1   107831596   homocysteine S-methyltransferase 2 
 nta-r.1   107799272   homocysteine S-methyltransferase 1 
 nta-r.1   107798163   homocysteine S-methyltransferase 1 
 cre-r.1   CHLRE_10g455650v5   uncharacterized protein 

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Top 50 coexpressed genes to 123098214 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123098214 (tae-r.2 coexpression data)

CoexMap"123098214"


taeLOC123098214 | Entrez gene ID : 123098214    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 3 2 2 2 3 3 2 3 3 3 3 3 2 2 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00270 [list] [network] Cysteine and methionine metabolism (411 genes)
taes00670 [list] [network] One carbon pool by folate (107 genes)
taes04981 [list] [network] Folate transport and metabolism (81 genes)
GO BP
GO:0033528 [list] [network] S-methylmethionine cycle  (9 genes)  IEA  
GO:0009086 [list] [network] methionine biosynthetic process  (69 genes)  IEA  
GO CC
GO MF
GO:0008898 [list] [network] S-adenosylmethionine-homocysteine S-methyltransferase activity  (9 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
Protein XP_044376074.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  pero 1  (predict for XP_044376074.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for XP_044376074.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123098214
tae-r.2
for
123092940
tae-r.2
for
123070948
tae-r.2
for
123062208
hvu-r.1
for
123449286
hvu-r.1
for
123451848
bdi-r.1
for
100841399
bdi-r.1
for
100838685
bdi-r.1
for
100836808
osa-u.5
for
4332095
osa-u.5
for
4352747
zma-u.5
for
541876
zma-u.5
for
541874
sbi-r.1
for
8056874
sbi-r.1
for
8070125
ath-u.5
for
HMT-1
ath-u.5
for
HMT3
ath-u.5
for
HMT2
gma-u.5
for
100812265
gma-u.5
for
100811127
gma-u.5
for
100790567
sly-u.5
for
101251816
sly-u.5
for
101262954
bra-r.6
for
103842126
bra-r.6
for
103869013
bra-r.6
for
103862723
vvi-u.5
for
100852835
vvi-u.5
for
100247323
vvi-u.5
for
100264835
ppo-u.5
for
7474182
ppo-u.5
for
7464849
ppo-u.5
for
7466898
mtr-u.5
for
25485172
mtr-u.5
for
11422561
mtr-u.5
for
25499146
ghi-r.1
for
107927633
ghi-r.1
for
107951360
ghi-r.1
for
107914791
bna-r.1
for
106415841
bna-r.1
for
106349415
sot-r.1
for
102595885
sot-r.1
for
102595383
cit-r.1
for
102628438
cit-r.1
for
102614076
cit-r.1
for
102618286
nta-r.1
for
107831596
nta-r.1
for
107799272
nta-r.1
for
107798163
cre-r.1
for
CHLRE_10g455650v5


Ortholog ID: 1543
Species tae tae tae hvu hvu bdi bdi bdi osa osa zma zma sbi sbi ath ath ath gma gma gma sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna sot sot cit cit cit nta nta nta cre
Symbol LOC123074822 LOC123110477 LOC123102264 LOC123449286 LOC123451848 LOC100841399 LOC100838685 LOC100836808 LOC4332095 LOC4352747 LOC541874 LOC541873 LOC8056874 LOC8070125 HMT-1 HMT3 HMT2 LOC100812265 LOC100811127 LOC100790567 LOC101251816 LOC101262954 LOC103842126 LOC103869013 LOC103875335 LOC100852835 LOC100247323 LOC100264835 LOC7474182 LOC7464849 LOC7466898 LOC25485172 LOC11422561 LOC25499146 LOC107951360 LOC107914791 LOC107903800 LOC125578518 LOC102595885 LOC102595383 LOC102628438 LOC102614076 LOC102618286 LOC107831596 LOC107796068 LOC107759758 CHLRE_10g455650v5
Function* homocysteine S-methyltransferase 4 homocysteine S-methyltransferase 3 homocysteine S-methyltransferase 3 homocysteine S-methyltransferase 1 homocysteine S-methyltransferase 3-like homocysteine S-methyltransferase 1 homocysteine S-methyltransferase 4 homocysteine S-methyltransferase 3 homocysteine S-methyltransferase 1 homocysteine S-methyltransferase 2 homocysteine S-methyltransferase-2 homocysteine S-methyltransferase 1 homocysteine S-methyltransferase 1 homocysteine S-methyltransferase 3 Homocysteine S-methyltransferase family protein homocysteine S-methyltransferase 3 homocysteine methyltransferase 2 homocysteine S-methyltransferase 1 homocysteine S-methyltransferase 3-like selenocysteine methyltransferase homocysteine S-methyltransferase 2 homocysteine S-methyltransferase 2 selenocysteine Se-methyltransferase-like homocysteine S-methyltransferase 3 homocysteine S-methyltransferase 1 homocysteine S-methyltransferase 2 homocysteine S-methyltransferase 1 homocysteine S-methyltransferase 3 homocysteine S-methyltransferase 3 homocysteine S-methyltransferase 2 homocysteine S-methyltransferase 1 homocysteine S-methyltransferase 3 homocysteine S-methyltransferase 1 selenocysteine methyltransferase homocysteine S-methyltransferase 2 homocysteine S-methyltransferase 2 homocysteine S-methyltransferase 1 selenocysteine Se-methyltransferase-like homocysteine S-methyltransferase 2 homocysteine S-methyltransferase 2-like selenocysteine methyltransferase homocysteine S-methyltransferase 1 homocysteine S-methyltransferase 3 homocysteine S-methyltransferase 2 homocysteine S-methyltransferase 2 homocysteine S-methyltransferase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae00670 One carbon pool by folate 3
tae04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 6
tae04075 Plant hormone signal transduction 6
tae00270 Cysteine and methionine metabolism 3
tae00670 One carbon pool by folate 3
tae04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
tae04075 Plant hormone signal transduction 4
tae00270 Cysteine and methionine metabolism 3
tae00670 One carbon pool by folate 3
tae04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu04130 SNARE interactions in vesicular transport 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00920 Sulfur metabolism 2
hvu01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 5
bdi04626 Plant-pathogen interaction 5
bdi04981 Folate transport and metabolism 3
bdi00592 alpha-Linolenic acid metabolism 2
bdi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 4
bdi00450 Selenocompound metabolism 3
bdi01230 Biosynthesis of amino acids 3
bdi00920 Sulfur metabolism 2
bdi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 8
osa01230 Biosynthesis of amino acids 6
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
osa00360 Phenylalanine metabolism 4
osa00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 4
osa00920 Sulfur metabolism 3
osa01320 Sulfur cycle 3
osa00220 Arginine biosynthesis 2
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 6
zma00520 Amino sugar and nucleotide sugar metabolism 3
zma01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00920 Sulfur metabolism 4
zma00270 Cysteine and methionine metabolism 3
zma00670 One carbon pool by folate 2
zma01230 Biosynthesis of amino acids 2
zma04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 4
sbi00940 Phenylpropanoid biosynthesis 3
sbi00941 Flavonoid biosynthesis 3
sbi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01210 2-Oxocarboxylic acid metabolism 10
ath00966 Glucosinolate biosynthesis 8
ath00290 Valine, leucine and isoleucine biosynthesis 3
ath00270 Cysteine and methionine metabolism 3
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00920 Sulfur metabolism 3
gma01320 Sulfur cycle 3
gma00670 One carbon pool by folate 3
gma04981 Folate transport and metabolism 3
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 3
gma00920 Sulfur metabolism 3
gma00270 Cysteine and methionine metabolism 3
gma01240 Biosynthesis of cofactors 2
gma00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
sly01230 Biosynthesis of amino acids 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01210 2-Oxocarboxylic acid metabolism 7
bra00966 Glucosinolate biosynthesis 6
bra00270 Cysteine and methionine metabolism 2
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
vvi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
vvi00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 3
ppo00270 Cysteine and methionine metabolism 2
ppo04981 Folate transport and metabolism 2
ppo00920 Sulfur metabolism 2
ppo01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 7
ppo00270 Cysteine and methionine metabolism 7
ppo00260 Glycine, serine and threonine metabolism 6
ppo01200 Carbon metabolism 6
ppo00670 One carbon pool by folate 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 4
mtr00520 Amino sugar and nucleotide sugar metabolism 3
mtr00270 Cysteine and methionine metabolism 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 10
mtr00670 One carbon pool by folate 7
mtr00270 Cysteine and methionine metabolism 6
mtr01240 Biosynthesis of cofactors 4
mtr01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00670 One carbon pool by folate 2
ghi04981 Folate transport and metabolism 2
ghi00052 Galactose metabolism 2
ghi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00670 One carbon pool by folate 2
ghi04981 Folate transport and metabolism 2
ghi00052 Galactose metabolism 2
ghi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00670 One carbon pool by folate 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00670 One carbon pool by folate 4
bna04981 Folate transport and metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 2
sot03010 Ribosome 2
sot04141 Protein processing in endoplasmic reticulum 2
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 7
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 3
cit00670 One carbon pool by folate 2
cit04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 3
cit00670 One carbon pool by folate 2
cit04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00670 One carbon pool by folate 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00670 One carbon pool by folate 2
nta04981 Folate transport and metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 6
nta00670 One carbon pool by folate 4
nta00280 Valine, leucine and isoleucine degradation 4
nta00270 Cysteine and methionine metabolism 3
nta00260 Glycine, serine and threonine metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123074822 123110477 123102264 123449286 123451848 100841399 100838685 100836808 4332095 4352747 541874 541873 8056874 8070125 822186 821845 825500 100812265 100811127 100790567 101251816 101262954 103842126 103869013 103875335 100852835 100247323 100264835 7474182 7464849 7466898 25485172 11422561 25499146 107951360 107914791 107903800 125578518 102595885 102595383 102628438 102614076 102618286 107831596 107796068 107759758 66055113
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