ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123099638	short-chain dehydrogenase TIC 32, chloroplastic
tae-r.2	123068661	short-chain dehydrogenase TIC 32 B, chloroplastic
hvu-r.1	123448179	uncharacterized LOC123448179
hvu-r.1	123447938	short-chain dehydrogenase TIC 32, chloroplastic-like
bdi-r.1	100830870	short-chain dehydrogenase TIC 32, chloroplastic
bdi-r.1	100827514	uncharacterized LOC100827514
bdi-r.1	100827273	short-chain dehydrogenase TIC 32, chloroplastic
osa-u.5	4335398	short-chain dehydrogenase TIC 32, chloroplastic
osa-u.5	4347912	short-chain dehydrogenase TIC 32, chloroplastic
osa-u.5	4324493	short-chain dehydrogenase TIC 32 B, chloroplastic
zma-u.5	100500950	retinol dehydrogenase 11
zma-u.5	100282710	retinol dehydrogenase 12
zma-u.5	100272665	Short-chain dehydrogenase TIC 32 chloroplastic
sbi-r.1	8072772	short-chain dehydrogenase TIC 32, chloroplastic
sbi-r.1	8073299	short-chain dehydrogenase TIC 32, chloroplastic
ath-u.5	AT2G37540	NAD(P)-binding Rossmann-fold superfamily protein
ath-u.5	AT4G11410	NAD(P)-binding Rossmann-fold superfamily protein
ath-u.5	AT4G23420	NAD(P)-binding Rossmann-fold superfamily protein
gma-u.5	100793781	short-chain dehydrogenase TIC 32, chloroplastic
gma-u.5	100794358	short-chain dehydrogenase TIC 32, chloroplastic
gma-u.5	100795299	retinol dehydrogenase 12-like
sly-u.5	101246319	short-chain dehydrogenase TIC 32, chloroplastic-like
sly-u.5	101263363	short-chain dehydrogenase TIC 32 B, chloroplastic
bra-r.6	103834281	short-chain dehydrogenase TIC 32, chloroplastic-like
bra-r.6	103867188	short-chain dehydrogenase TIC 32 B, chloroplastic
bra-r.6	103843875	short-chain dehydrogenase TIC 32 A, chloroplastic
vvi-u.5	100252592	short-chain dehydrogenase TIC 32, chloroplastic
vvi-u.5	100264493	short-chain dehydrogenase TIC 32, chloroplastic
vvi-u.5	100253030	short-chain dehydrogenase TIC 32, chloroplastic
ppo-u.5	7482074	short-chain dehydrogenase TIC 32, chloroplastic
ppo-u.5	7457761	short-chain dehydrogenase TIC 32 B, chloroplastic
ppo-u.5	7458067	short-chain dehydrogenase TIC 32 B, chloroplastic
mtr-u.5	25496527	short-chain dehydrogenase TIC 32, chloroplastic
mtr-u.5	25502056	short-chain dehydrogenase TIC 32, chloroplastic
mtr-u.5	25496525	short-chain dehydrogenase TIC 32, chloroplastic
ghi-r.1	107926626	short-chain dehydrogenase TIC 32 B, chloroplastic
ghi-r.1	107929263	short-chain dehydrogenase TIC 32, chloroplastic
bna-r.1	106401807	short-chain dehydrogenase TIC 32, chloroplastic
bna-r.1	106372593	short-chain dehydrogenase TIC 32 A, chloroplastic-like
sot-r.1	102579773	short-chain dehydrogenase TIC 32, chloroplastic-like
sot-r.1	102579450	short-chain dehydrogenase TIC 32, chloroplastic-like
cit-r.1	102621527	short-chain dehydrogenase TIC 32, chloroplastic-like
cit-r.1	102621246	short-chain dehydrogenase TIC 32, chloroplastic-like
cit-r.1	102611079	short-chain dehydrogenase TIC 32 B, chloroplastic
nta-r.1	107817497	short-chain dehydrogenase TIC 32 B, chloroplastic
nta-r.1	107823666	short-chain dehydrogenase TIC 32, chloroplastic
nta-r.1	107820935	short-chain dehydrogenase TIC 32, chloroplastic-like
cre-r.1	CHLRE_09g398252v5	uncharacterized protein
cre-r.1	CHLRE_12g556802v5	uncharacterized protein
cre-r.1	CHLRE_12g556750v5	uncharacterized protein

Top 50 coexpressed genes to 123099638 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123099638 (tae-r.2 coexpression data)

CoexMap"123099638"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044377692.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 3, cyto 1, mito 1, plas 1, cysk 1, cyto_pero 1, cysk_plas 1, mito_plas 1, cyto_E.R. 1

(predict for XP_044377692.1)

Subcellular
localization
TargetP

mito 6, other 4

(predict for XP_044377692.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123099638	tae-r.2 for 123068661	hvu-r.1 for 123448179	hvu-r.1 for 123447938	bdi-r.1 for 100830870	bdi-r.1 for 100827514	bdi-r.1 for 100827273	osa-u.5 for 4335398	osa-u.5 for 4347912	osa-u.5 for 4324493	zma-u.5 for 100500950	zma-u.5 for 100282710	zma-u.5 for 100272665	sbi-r.1 for 8072772	sbi-r.1 for 8073299	ath-u.5 for AT2G37540	ath-u.5 for AT4G11410	ath-u.5 for AT4G23420	gma-u.5 for 100793781	gma-u.5 for 100794358	gma-u.5 for 100795299	sly-u.5 for 101246319	sly-u.5 for 101263363	bra-r.6 for 103834281	bra-r.6 for 103867188	bra-r.6 for 103843875	vvi-u.5 for 100252592	vvi-u.5 for 100264493	vvi-u.5 for 100253030	ppo-u.5 for 7482074	ppo-u.5 for 7457761	ppo-u.5 for 7458067	mtr-u.5 for 25496527	mtr-u.5 for 25502056	mtr-u.5 for 25496525	ghi-r.1 for 107926626	ghi-r.1 for 107929263	bna-r.1 for 106401807	bna-r.1 for 106372593	sot-r.1 for 102579773	sot-r.1 for 102579450	cit-r.1 for 102621527	cit-r.1 for 102621246	cit-r.1 for 102611079	nta-r.1 for 107817497	nta-r.1 for 107823666	nta-r.1 for 107820935	cre-r.1 for CHLRE_09g398252v5	cre-r.1 for CHLRE_12g556802v5	cre-r.1 for CHLRE_12g556750v5

Ortholog

Ortholog ID: 223

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*