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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4345840   ubiquitin carboxyl-terminal hydrolase 17 
 osa-u.5   4347307   ubiquitin carboxyl-terminal hydrolase 17 
 zma-u.5   103643160   ubiquitin carboxyl-terminal hydrolase 17-like 
 zma-u.5   103634170   ubiquitin carboxyl-terminal hydrolase 18 
 zma-u.5   100277781   uncharacterized LOC100277781 
 ath-u.5   UBP16   ubiquitin-specific protease 16 
 ath-u.5   UBP17   ubiquitin-specific protease 17 
 gma-u.5   100815856   ubiquitin carboxyl-terminal hydrolase 16 
 gma-u.5   100811058   ubiquitin carboxyl-terminal hydrolase 17 
 gma-u.5   100795674   ubiquitin carboxyl-terminal hydrolase 17 
 sly-u.5   101252175   ubiquitin carboxyl-terminal hydrolase 16 
 vvi-u.5   100257420   ubiquitin carboxyl-terminal hydrolase 16 
 vvi-u.5   100853437   ubiquitin carboxyl-terminal hydrolase 17 
 ppo-u.5   7461817   ubiquitin carboxyl-terminal hydrolase 16 
 ppo-u.5   7486557   ubiquitin carboxyl-terminal hydrolase 17 
 mtr-u.5   11429833   ubiquitin carboxyl-terminal hydrolase 16 
 mtr-u.5   11437133   ubiquitin carboxyl-terminal hydrolase 17 
 mtr-u.5   11405494   ubiquitin carboxyl-terminal hydrolase 17 

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Top 50 coexpressed genes to 4345840 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4345840 (osa-u.5 coexpression data)

CoexMap"123104023"


taeLOC123104023 | Entrez gene ID : 123104023    
Species osa zma ath gma sly vvi ppo mtr hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 2 3 2 3 1 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (280 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2324 genes)  IEA  
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (249 genes)  IEA  
Protein XP_044381676.1 [sequence] [blastp]
XP_044381677.1 [sequence] [blastp]
XP_044381678.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  vacu 4,  extr 1  (predict for XP_044381676.1)
chlo 5,  vacu 4,  extr 1  (predict for XP_044381677.1)
chlo 4,  vacu 4,  extr 1  (predict for XP_044381678.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_044381676.1)
scret 9  (predict for XP_044381677.1)
scret 9  (predict for XP_044381678.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4345840
osa-u.5
for
4347307
zma-u.5
for
103643160
zma-u.5
for
103634170
zma-u.5
for
100277781
ath-u.5
for
UBP16
ath-u.5
for
UBP17
gma-u.5
for
100815856
gma-u.5
for
100811058
gma-u.5
for
100795674
sly-u.5
for
101252175
vvi-u.5
for
100257420
vvi-u.5
for
100853437
ppo-u.5
for
7461817
ppo-u.5
for
7486557
mtr-u.5
for
11429833
mtr-u.5
for
11437133
mtr-u.5
for
11405494


Ortholog ID: 3124
Species hvu hvu bdi osa osa zma zma sbi sbi ath ath gma gma sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot cit cit nta nta cre
Symbol LOC123407832 LOC123398886 LOC100840139 LOC4347307 LOC4345840 LOC100277781 LOC103643160 LOC8056909 LOC8063721 UBP17 UBP16 LOC100795674 LOC100811058 LOC101252175 LOC103862275 LOC103873979 LOC100257420 LOC100853437 LOC7486557 LOC7461817 LOC11437133 LOC11405494 LOC107951413 LOC107910219 LOC106440788 LOC106396521 LOC102606234 LOC102607676 LOC102625250 LOC107809628 LOC107796986 CHLRE_12g508450v5
Function* ubiquitin carboxyl-terminal hydrolase 17-like ubiquitin carboxyl-terminal hydrolase 17-like ubiquitin carboxyl-terminal hydrolase 19 ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 17 uncharacterized LOC100277781 ubiquitin carboxyl-terminal hydrolase 17-like ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 16 ubiquitin-specific protease 17 ubiquitin-specific protease 16 ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 16 ubiquitin carboxyl-terminal hydrolase 16 ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 16 ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 16 ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 16 ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 16-like ubiquitin carboxyl-terminal hydrolase 16 ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 17 ubiquitin carboxyl-terminal hydrolase 16 ubiquitin carboxyl-terminal hydrolase 16 ubiquitin carboxyl-terminal hydrolase 16 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi04145 Phagosome 3
sbi00541 Biosynthesis of various nucleotide sugars 2
sbi03060 Protein export 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi03040 Spliceosome 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
ppo00514 Other types of O-glycan biosynthesis 2
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 4
ghi03018 RNA degradation 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 4
ghi03018 RNA degradation 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 4
sot04144 Endocytosis 3
sot00970 Aminoacyl-tRNA biosynthesis 2
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta02010 ABC transporters 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta02010 ABC transporters 2
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123407832 123398886 100840139 4347307 4345840 100277781 103643160 8056909 8063721 836670 828558 100795674 100811058 101252175 103862275 103873979 100257420 100853437 7486557 7461817 11437133 11405494 107951413 107910219 106440788 106396521 102606234 102607676 102625250 107809628 107796986 66055532
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