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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123113583   DNA-binding protein HEXBP 
 tae-r.2   123105321   DNA-binding protein HEXBP 
 tae-r.2   123123110   DNA-binding protein HEXBP 
 hvu-r.1   123452584   DNA-binding protein HEXBP-like 
 bdi-r.1   100838417   DNA-binding protein HEXBP 
 osa-u.5   4334351   uncharacterized LOC4334351 
 zma-u.5   103644140   DNA-binding protein HEXBP 
 sbi-r.1   8083913   cold shock domain-containing protein 3 
 ath-u.5   AT3G42860   zinc knuckle (CCHC-type) family protein 
 ath-u.5   AT5G13920   GRF zinc finger / Zinc knuckle protein 
 gma-u.5   100802558   uncharacterized LOC100802558 
 gma-u.5   100527087   putative GRF zinc finger protein 
 gma-u.5   100804614   uncharacterized LOC100804614 
 sly-u.5   101256221   uncharacterized LOC101256221 
 bra-r.6   103845042   DNA-binding protein HEXBP 
 bra-r.6   103856039   uncharacterized LOC103856039 
 bra-r.6   103838711   uncharacterized LOC103838711 
 vvi-u.5   100245024   cold shock protein 1 
 ppo-u.5   18109015   uncharacterized LOC18109015 
 ppo-u.5   18102133   uncharacterized LOC18102133 
 ppo-u.5   18095236   cold shock domain-containing protein 3 
 mtr-u.5   112416361   uncharacterized LOC112416361 
 mtr-u.5   112416309   uncharacterized LOC112416309 
 ghi-r.1   107962951   DNA-binding protein HEXBP 
 ghi-r.1   107901775   DNA-binding protein HEXBP-like 
 bna-r.1   111214308   uncharacterized LOC111214308 
 bna-r.1   106431170   uncharacterized LOC106431170 
 cit-r.1   127900460   uncharacterized LOC127900460 
 cit-r.1   102607900   uncharacterized LOC102607900 
 nta-r.1   107799124   uncharacterized LOC107799124 
 nta-r.1   107797633   uncharacterized LOC107797633 

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Top 50 coexpressed genes to 123113583 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123113583 (tae-r.2 coexpression data)

CoexMap"123113583"


taeLOC123113583 | Entrez gene ID : 123113583    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna cit nta cre sot
Paralog 3 1 1 1 1 1 2 3 1 3 1 3 2 2 2 2 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (11810 genes)  IEA  
Protein XP_044390808.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for XP_044390808.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_044390808.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123113583
tae-r.2
for
123105321
tae-r.2
for
123123110
hvu-r.1
for
123452584
bdi-r.1
for
100838417
osa-u.5
for
4334351
zma-u.5
for
103644140
sbi-r.1
for
8083913
ath-u.5
for
AT3G42860
ath-u.5
for
AT5G13920
gma-u.5
for
100802558
gma-u.5
for
100527087
gma-u.5
for
100804614
sly-u.5
for
101256221
bra-r.6
for
103845042
bra-r.6
for
103856039
bra-r.6
for
103838711
vvi-u.5
for
100245024
ppo-u.5
for
18109015
ppo-u.5
for
18102133
ppo-u.5
for
18095236
mtr-u.5
for
112416361
mtr-u.5
for
112416309
ghi-r.1
for
107962951
ghi-r.1
for
107901775
bna-r.1
for
111214308
bna-r.1
for
106431170
cit-r.1
for
127900460
cit-r.1
for
102607900
nta-r.1
for
107799124
nta-r.1
for
107797633


Ortholog ID: 4923
Species tae tae tae hvu bdi osa zma sbi ath ath gma gma gma sly bra bra bra vvi ppo ppo ppo mtr mtr ghi ghi bna bna bna cit cit nta nta
Symbol LOC123113583 LOC123105321 LOC123123110 LOC123452584 LOC100838417 LOC4334351 LOC103644140 LOC8083913 AT3G42860 AT5G13920 LOC100802558 LOC100527087 LOC100804614 LOC101256221 LOC103845042 LOC103856039 LOC103838711 LOC100245024 LOC18109015 LOC18102133 LOC18095236 LOC112416361 LOC112416309 LOC107962951 LOC107901775 LOC106386738 LOC106380438 LOC106371363 LOC127900460 LOC102607900 LOC107799124 LOC107797633
Function* DNA-binding protein HEXBP DNA-binding protein HEXBP DNA-binding protein HEXBP DNA-binding protein HEXBP-like DNA-binding protein HEXBP uncharacterized LOC4334351 DNA-binding protein HEXBP cold shock domain-containing protein 3 zinc knuckle (CCHC-type) family protein GRF zinc finger / Zinc knuckle protein uncharacterized LOC100802558 putative GRF zinc finger protein uncharacterized LOC100804614 uncharacterized LOC101256221 DNA-binding protein HEXBP uncharacterized LOC103856039 uncharacterized LOC103838711 cold shock protein 1 uncharacterized LOC18109015 uncharacterized LOC18102133 cold shock domain-containing protein 3 uncharacterized LOC112416361 uncharacterized LOC112416309 DNA-binding protein HEXBP DNA-binding protein HEXBP-like uncharacterized LOC106386738 cold shock protein 1 cold shock protein 1 uncharacterized LOC127900460 uncharacterized LOC102607900 uncharacterized LOC107799124 uncharacterized LOC107797633
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
osa00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma04075 Plant hormone signal transduction 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 2
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00670 One carbon pool by folate 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123113583 123105321 123123110 123452584 100838417 4334351 103644140 8083913 823332 831239 100802558 100527087 100804614 101256221 103845042 103856039 103838711 100245024 18109015 18102133 18095236 112416361 112416309 107962951 107901775 106386738 106380438 106371363 127900460 102607900 107799124 107797633
The preparation time of this page was 2.0 [sec].