ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123114300	zinc finger CCCH domain-containing protein 18
tae-r.2	123123790	serine/arginine repetitive matrix protein 1
tae-r.2	123164767	glutamic acid-rich protein
tae-r.2	123156600	TRAF3-interacting protein 1
hvu-r.1	123407805	uncharacterized protein DDB_G0284459
hvu-r.1	123395080	serine/arginine repetitive matrix protein 1-like
bdi-r.1	100822097	mediator of RNA polymerase II transcription subunit 1.1
bdi-r.1	100838614	zinc finger CCCH domain-containing protein 13
osa-u.5	107278708	uncharacterized LOC107278708
osa-u.5	4334775	uncharacterized LOC4334775
zma-u.5	103627942	uncharacterized protein DDB_G0284459
zma-u.5	103644324	glutamic acid-rich protein
sbi-r.1	8060968	uncharacterized LOC8060968
sbi-r.1	8080156	myb-like protein X
ath-u.5	AT5G48610	myb-like protein X
gma-u.5	102668076	myb-like protein X
gma-u.5	100787189	myb-like protein X
sly-u.5	101260029	uncharacterized LOC101260029
sly-u.5	101256675	uncharacterized LOC101256675
bra-r.6	103849388	glutamic acid-rich protein
bra-r.6	103874971	TRAF3-interacting protein 1
bra-r.6	103859209	myb-like protein X
vvi-u.5	100250375	uncharacterized LOC100250375
vvi-u.5	100245554	uncharacterized LOC100245554
ppo-u.5	7495841	DEAD-box ATP-dependent RNA helicase 42
ppo-u.5	7495842	uncharacterized LOC7495842
mtr-u.5	112419799	myb-like protein X
mtr-u.5	11411351	DNA ligase 1
ghi-r.1	107914738	glutamic acid-rich protein
ghi-r.1	107934478	DEAD-box ATP-dependent RNA helicase 42
ghi-r.1	107939143	myb-like protein X
bna-r.1	111206244	glutamic acid-rich protein-like
bna-r.1	106349001	TRAF3-interacting protein 1
bna-r.1	106389014	myb-like protein X
sot-r.1	102581845	myb-like protein X
sot-r.1	102602389	transcription initiation factor TFIID subunit 3-like
cit-r.1	102622758	uncharacterized LOC102622758
cit-r.1	102623498	uncharacterized LOC102623498
nta-r.1	107767395	uncharacterized LOC107767395
nta-r.1	107808027	uncharacterized LOC107808027
nta-r.1	107808026	uncharacterized LOC107808026

Top 50 coexpressed genes to 123114300 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123114300 (tae-r.2 coexpression data)

CoexMap"123114300"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044391664.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 3

(predict for XP_044391664.1)

Subcellular
localization
TargetP

other 7, mito 3

(predict for XP_044391664.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123114300	tae-r.2 for 123123790	tae-r.2 for 123164767	tae-r.2 for 123156600	hvu-r.1 for 123407805	hvu-r.1 for 123395080	bdi-r.1 for 100822097	bdi-r.1 for 100838614	osa-u.5 for 107278708	osa-u.5 for 4334775	zma-u.5 for 103627942	zma-u.5 for 103644324	sbi-r.1 for 8060968	sbi-r.1 for 8080156	ath-u.5 for AT5G48610	gma-u.5 for 102668076	gma-u.5 for 100787189	sly-u.5 for 101260029	sly-u.5 for 101256675	bra-r.6 for 103849388	bra-r.6 for 103874971	bra-r.6 for 103859209	vvi-u.5 for 100250375	vvi-u.5 for 100245554	ppo-u.5 for 7495841	ppo-u.5 for 7495842	mtr-u.5 for 112419799	mtr-u.5 for 11411351	ghi-r.1 for 107914738	ghi-r.1 for 107934478	ghi-r.1 for 107939143	bna-r.1 for 111206244	bna-r.1 for 106349001	bna-r.1 for 106389014	sot-r.1 for 102581845	sot-r.1 for 102602389	cit-r.1 for 102622758	cit-r.1 for 102623498	nta-r.1 for 107767395	nta-r.1 for 107808027	nta-r.1 for 107808026

Ortholog

Ortholog ID: 2508

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

zinc finger CCCH domain-containing protein 18

TRAF3-interacting protein 1

triadin

uncharacterized protein DDB_G0284459

serine/arginine repetitive matrix protein 1-like

mediator of RNA polymerase II transcription subunit 1.1

zinc finger CCCH domain-containing protein 13

uncharacterized LOC107278708

uncharacterized LOC4334775

uncharacterized protein DDB_G0284459

glutamic acid-rich protein

uncharacterized LOC8060968

myb-like protein X

uncharacterized LOC101260029

uncharacterized LOC101256675

glutamic acid-rich protein

TRAF3-interacting protein 1

myb-like protein X

uncharacterized LOC100250375

uncharacterized LOC100245554

DEAD-box ATP-dependent RNA helicase 42

uncharacterized LOC7495842

myb-like protein X

DNA ligase 1

DEAD-box ATP-dependent RNA helicase 42

myb-like protein X

glutamic acid-rich protein-like

myb-like protein X

TRAF3-interacting protein 1-like

myb-like protein X

transcription initiation factor TFIID subunit 3-like

uncharacterized LOC102622758

uncharacterized LOC102623498

uncharacterized LOC107808027

uncharacterized LOC107808026

uncharacterized LOC107770135

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae04145	Phagosome	3
tae04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03420	Nucleotide excision repair	2
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	6
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	3
mtr03040	Spliceosome	3
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2
cit03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

123114300

123151642

123087635

123407805

123395080

100822097

100838614

107278708

4334775

103627942

103644324

8060968

8080156

834918

102668076

100778584

101260029

101256675

103849388

103874971

103859209

100250375

100245554

7495841

7495842

112419799

11411351

107934478

107939143

107890498

111206244

106389014

125601819

102581845

102602389

102622758

102623498

107808027

107808026

107770135

The preparation time of this page was 0.1 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	2	2	2	2	1	2	2	3	2	2	2	3	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123114300 (tae-r.2 coexpression data)

Top 50 enrichment test to 123114300 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**