ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123120767	tropinone reductase-like 3
tae-r.2	123103327	tropinone reductase-like 3
tae-r.2	123111518	tropinone reductase-like 3
hvu-r.1	123399934	tropinone reductase-like 3
bdi-r.1	100832643	tropinone reductase-like 3
osa-u.5	4346459	tropinone reductase-like 3
zma-u.5	100282854	uncharacterized LOC100282854
zma-u.5	100273876	Short-chain dehydrogenase/reductase SDRA
sbi-r.1	8084637	tropinone reductase-like 3
sbi-r.1	8069012	tropinone reductase-like 3
ath-u.5	IBR1	indole-3-butyric acid response 1
gma-u.5	100170726	peroxisomal short-chain dehydrogenase/reductase family protein
gma-u.5	100527263	SDR domain-containing protein
gma-u.5	100809582	dehydrogenase/reductase SDR family member 4-like
sly-u.5	101264111	tropinone reductase-like 3
bra-r.6	103834242	short-chain dehydrogenase/reductase SDRA
bra-r.6	103839858	short-chain dehydrogenase/reductase SDRA
vvi-u.5	100266107	short-chain dehydrogenase/reductase SDRA
vvi-u.5	100257814	tropinone reductase-like 3
ppo-u.5	7484330	tropinone reductase-like 3
ppo-u.5	7484272	tropinone reductase-like 3
mtr-u.5	11439071	tropinone reductase-like 3
ghi-r.1	107905900	short-chain dehydrogenase/reductase SDRA
ghi-r.1	107905675	short-chain dehydrogenase/reductase SDRA
ghi-r.1	107924910	tropinone reductase-like 3
bna-r.1	106383089	short-chain dehydrogenase/reductase SDRA-like
bna-r.1	106381589	short-chain dehydrogenase/reductase SDRA
bna-r.1	106366122	short-chain dehydrogenase/reductase SDRA
sot-r.1	102584499	tropinone reductase-like 3
sot-r.1	102604081	tropinone reductase-like 3
cit-r.1	102609432	short-chain dehydrogenase/reductase SDRA
cit-r.1	102609143	tropinone reductase-like 3
nta-r.1	107823087	tropinone reductase-like 3
nta-r.1	107788737	tropinone reductase-like 3
nta-r.1	107775270	tropinone reductase-like 3
cre-r.1	CHLRE_03g191850v5	uncharacterized protein

Top 50 coexpressed genes to 123120767 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123120767 (tae-r.2 coexpression data)

CoexMap"123120767"

[Cytoscape]

Annotation

functional annotation

KEGG

taes04146 [list] [network] Peroxisome (287 genes)

GO BP

GO CC

GO MF

GO:0016491 [list] [network] oxidoreductase activity

(5317 genes)

IEA

Protein

XP_044396693.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, vacu 3, chlo_mito 3, cyto 1, E.R._vacu 1

(predict for XP_044396693.1)

Subcellular
localization
TargetP

scret 4, other 3

(predict for XP_044396693.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123120767	tae-r.2 for 123103327	tae-r.2 for 123111518	hvu-r.1 for 123399934	bdi-r.1 for 100832643	osa-u.5 for 4346459	zma-u.5 for 100282854	zma-u.5 for 100273876	sbi-r.1 for 8084637	sbi-r.1 for 8069012	ath-u.5 for IBR1	gma-u.5 for 100170726	gma-u.5 for 100527263	gma-u.5 for 100809582	sly-u.5 for 101264111	bra-r.6 for 103834242	bra-r.6 for 103839858	vvi-u.5 for 100266107	vvi-u.5 for 100257814	ppo-u.5 for 7484330	ppo-u.5 for 7484272	mtr-u.5 for 11439071	ghi-r.1 for 107905900	ghi-r.1 for 107905675	ghi-r.1 for 107924910	bna-r.1 for 106383089	bna-r.1 for 106381589	bna-r.1 for 106366122	sot-r.1 for 102584499	sot-r.1 for 102604081	cit-r.1 for 102609432	cit-r.1 for 102609143	nta-r.1 for 107823087	nta-r.1 for 107788737	nta-r.1 for 107775270	cre-r.1 for CHLRE_03g191850v5

Ortholog

Ortholog ID: 4757

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

IBR1

Function^*

tropinone reductase-like 3

uncharacterized LOC100282854

Short-chain dehydrogenase/reductase SDRA

tropinone reductase-like 3

indole-3-butyric acid response 1

peroxisomal short-chain dehydrogenase/reductase family protein

SDR domain-containing protein

dehydrogenase/reductase SDR family member 4-like

tropinone reductase-like 3

short-chain dehydrogenase/reductase SDRA

tropinone reductase-like 3

short-chain dehydrogenase/reductase SDRA

tropinone reductase-like 3

short-chain dehydrogenase/reductase SDRA

tropinone reductase-like 3

short-chain dehydrogenase/reductase SDRA

tropinone reductase-like 3

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	3
tae04142	Lysosome	3
tae04145	Phagosome	3
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	3
tae04142	Lysosome	3
tae04145	Phagosome	3
tae00790	Folate biosynthesis	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	3
tae04142	Lysosome	3
tae04145	Phagosome	3
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	5
bdi04145	Phagosome	4
bdi00620	Pyruvate metabolism	4
bdi00061	Fatty acid biosynthesis	3
bdi01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00270	Cysteine and methionine metabolism	5
osa01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	5
sbi04136	Autophagy - other	3
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	8
sbi03010	Ribosome	6
sbi04146	Peroxisome	3
sbi03083	Polycomb repressive complex	3
sbi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	6
ath00020	Citrate cycle (TCA cycle)	5
ath00190	Oxidative phosphorylation	4
ath01230	Biosynthesis of amino acids	3
ath04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	3
gma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2
gma00260	Glycine, serine and threonine metabolism	2
gma00350	Tyrosine metabolism	2
gma00360	Phenylalanine metabolism	2
gma00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	4
gma04146	Peroxisome	2
gma00260	Glycine, serine and threonine metabolism	2
gma00350	Tyrosine metabolism	2
gma00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	3
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00071	Fatty acid degradation	5
bra01212	Fatty acid metabolism	5
bra00592	alpha-Linolenic acid metabolism	4
bra04146	Peroxisome	3
bra00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra04145	Phagosome	2
bra00071	Fatty acid degradation	2
bra00592	alpha-Linolenic acid metabolism	2
bra01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01232	Nucleotide metabolism	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	3
ppo00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	6
ghi04145	Phagosome	4
ghi04146	Peroxisome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	3
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	5
cit03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	4
nta03008	Ribosome biogenesis in eukaryotes	2
nta03060	Protein export	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	6
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	6
nta04146	Peroxisome	2
nta00300	Lysine biosynthesis	2
nta01230	Biosynthesis of amino acids	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	3

Expression

Expression pattern

Entrez Gene ID^*

123120767

123103327

123111518

123399934

100832643

4346459

100282854

100273876

8084637

8069012

825905

100170726

100527263

100809582

101264111

103834242

103839858

100266107

100257814

7484330

7484272

11439071

107905900

107925101

107930440

106381589

106366122

106360981

102584499

102604081

102609432

102609143

107788737

107775270

107798923

5718687

The preparation time of this page was 0.3 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	1	2	2	1	3	1	2	2	2	1	3	3	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123120767 (tae-r.2 coexpression data)

Top 50 enrichment test to 123120767 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**