ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4324146	probable histone chaperone ASF1A
osa-u.5	4339549	syntaxin-71
zma-u.5	100283631	uncharacterized LOC100283631
ath-u.5	SYP71	syntaxin of plants 71
gma-u.5	100804155	syntaxin-71
sly-u.5	101253454	syntaxin-71-like
sly-u.5	101249033	syntaxin-71
vvi-u.5	100258712	syntaxin-71
vvi-u.5	100853404	syntaxin-71
vvi-u.5	100258582	syntaxin-71
ppo-u.5	18100210	syntaxin-71
ppo-u.5	7467617	syntaxin-71
mtr-u.5	11423274	syntaxin-71
mtr-u.5	11429735	syntaxin-71

functional annotation

KEGG

taes04130 [list] [network] SNARE interactions in vesicular transport (145 genes)

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(2781 genes)

IEA

GO MF

Protein

XP_044397201.1 [sequence] [blastp]
XP_044397202.1 [sequence] [blastp]
XP_044397203.1 [sequence] [blastp]
XP_044397204.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, cyto_nucl 2, cyto 2, nucl 2, cysk_nucl 1, cyto_pero 1, cyto_E.R. 1	(predict for XP_044397201.1)
chlo 3, cyto_nucl 2, nucl 2, cyto 1, cysk_nucl 1, cyto_pero 1	(predict for XP_044397202.1)
chlo 3, nucl 2, chlo_mito 2, cyto_nucl 1, cysk_nucl 1, mito 1	(predict for XP_044397203.1)
chlo 3, nucl 2, chlo_mito 2, cyto_nucl 1, cysk_nucl 1, mito 1	(predict for XP_044397204.1)

Subcellular
localization
TargetP

other 9	(predict for XP_044397201.1)
other 9	(predict for XP_044397202.1)
other 9	(predict for XP_044397203.1)
other 9	(predict for XP_044397204.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4324146	osa-u.5 for 4339549	zma-u.5 for 100283631	ath-u.5 for SYP71	gma-u.5 for 100804155	sly-u.5 for 101253454	sly-u.5 for 101249033	vvi-u.5 for 100258712	vvi-u.5 for 100853404	vvi-u.5 for 100258582	ppo-u.5 for 18100210	ppo-u.5 for 7467617	mtr-u.5 for 11423274	mtr-u.5 for 11429735

Ortholog ID: 1921

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

SYP71

Function^*

syntaxin-71

probable histone chaperone ASF1A

syntaxin-71

uncharacterized LOC100283631

syntaxin-71

syntaxin of plants 71

syntaxin-71

syntaxin-71-like

syntaxin-71

syntaxin-71-like

syntaxin-71

syntaxin-71-like

syntaxin-71

syntaxin-71-like

syntaxin-71

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	6
tae03013	Nucleocytoplasmic transport	2
tae03015	mRNA surveillance pathway	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04130	SNARE interactions in vesicular transport	2
hvu04141	Protein processing in endoplasmic reticulum	2
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	9
osa04145	Phagosome	7
osa04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	5
zma03050	Proteasome	2
zma03013	Nucleocytoplasmic transport	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	3
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2
gma04145	Phagosome	2
gma04130	SNARE interactions in vesicular transport	2
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00541	Biosynthesis of various nucleotide sugars	2
sly01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	9
vvi00190	Oxidative phosphorylation	4
vvi00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	7
ppo03050	Proteasome	2
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi04130	SNARE interactions in vesicular transport	4
ghi03250	Viral life cycle - HIV-1	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	7
ghi04130	SNARE interactions in vesicular transport	4
ghi00230	Purine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2
sot00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2
sot04142	Lysosome	2
sot04145	Phagosome	2
sot03050	Proteasome	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2
cit04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2
cit04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	4
nta03018	RNA degradation	2
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	6
nta03018	RNA degradation	2
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	6
cre04130	SNARE interactions in vesicular transport	2
cre03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04130	SNARE interactions in vesicular transport	6
cre04144	Endocytosis	4
cre03250	Viral life cycle - HIV-1	2
cre03272	Virion - Hepatitis viruses	2

Expression

Expression pattern

Entrez Gene ID^*

123144463

123449514

100822792

4324146

4339549

100283631

8063555

820132

100804155

101249033

101253454

103847949

103870522

100258582

100258712

7467617

11423274

107899658

107905292

106452763

106427952

102603109

102580450

127901480

102613617

107808330

107786060

5725580

5725581

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4324146 (osa-u.5 coexpression data)

Top 50 enrichment test to 4324146 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	2	1	1	1	2	3	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4324146 (osa-u.5 coexpression data)

Top 50 enrichment test to 4324146 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**