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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123121357   THO complex subunit 6 
 tae-r.2   123103569   THO complex subunit 6 
 tae-r.2   123111793   THO complex subunit 6 
 hvu-r.1   123395025   THO complex subunit 6 
 bdi-r.1   100825336   THO complex subunit 6 
 osa-u.5   4346861   THO complex subunit 6 
 zma-u.5   103632647   THO complex subunit 6 
 sbi-r.1   8055579   THO complex subunit 6 
 ath-u.5   DWA1   DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 
 gma-u.5   100820024   WD40 domain-containing protin 
 gma-u.5   100806423   THO complex subunit 6 
 sly-u.5   101264535   THO complex subunit 6 
 bra-r.6   103828298   THO complex subunit 6 
 vvi-u.5   100244028   uncharacterized LOC100244028 
 ppo-u.5   18101254   THO complex subunit 6 
 ghi-r.1   107899953   THO complex subunit 6 
 ghi-r.1   107895807   THO complex subunit 6 
 bna-r.1   106352952   THO complex subunit 6 
 bna-r.1   106390005   THO complex subunit 6-like 
 sot-r.1   102594146   THO complex subunit 6 
 cit-r.1   102619392   THO complex subunit 6 
 nta-r.1   107777567   THO complex subunit 6 
 nta-r.1   107787142   eukaryotic initiation factor 4A-9 
 cre-r.1   CHLRE_03g180200v5   uncharacterized protein 

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Top 50 coexpressed genes to 123121357 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123121357 (tae-r.2 coexpression data)

CoexMap"123121357"


taeLOC123121357 | Entrez gene ID : 123121357    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo ghi bna sot cit nta cre mtr
Paralog 3 1 1 1 1 1 1 2 1 1 1 1 2 2 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03013 [list] [network] Nucleocytoplasmic transport (365 genes)
taes03040 [list] [network] Spliceosome (1516 genes)
GO BP
GO:0006406 [list] [network] mRNA export from nucleus  (84 genes)  IEA  
GO CC
GO:0000346 [list] [network] transcription export complex  (22 genes)  IEA  
GO:0000347 [list] [network] THO complex  (22 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044397244.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cysk 3,  cyto_nucl 3  (predict for XP_044397244.1)
Subcellular
localization
TargetP
other 6  (predict for XP_044397244.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123121357
tae-r.2
for
123103569
tae-r.2
for
123111793
hvu-r.1
for
123395025
bdi-r.1
for
100825336
osa-u.5
for
4346861
zma-u.5
for
103632647
sbi-r.1
for
8055579
ath-u.5
for
DWA1
gma-u.5
for
100820024
gma-u.5
for
100806423
sly-u.5
for
101264535
bra-r.6
for
103828298
vvi-u.5
for
100244028
ppo-u.5
for
18101254
ghi-r.1
for
107899953
ghi-r.1
for
107895807
bna-r.1
for
106352952
bna-r.1
for
106390005
sot-r.1
for
102594146
cit-r.1
for
102619392
nta-r.1
for
107777567
nta-r.1
for
107787142
cre-r.1
for
CHLRE_03g180200v5


Ortholog ID: 10661
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo ghi ghi bna bna sot cit nta nta cre
Symbol LOC123121357 LOC123103569 LOC123111793 LOC123395025 LOC100825336 LOC4346861 LOC103632647 LOC8055579 DWA1 LOC100820024 LOC100806423 LOC101264535 LOC103828298 LOC100244028 LOC18101254 LOC107899953 LOC107895807 LOC106352952 LOC106390005 LOC102594146 LOC102619392 LOC107777567 LOC107787142 CHLRE_03g180200v5
Function* THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 WD40 domain-containing protin THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 uncharacterized LOC100244028 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6-like THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 eukaryotic initiation factor 4A-9 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 4
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03040 Spliceosome 9
tae03015 mRNA surveillance pathway 6
tae00040 Pentose and glucuronate interconversions 2
tae00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 4
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03010 Ribosome 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03018 RNA degradation 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 5
gma00513 Various types of N-glycan biosynthesis 5
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 4
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
bna03013 Nucleocytoplasmic transport 3
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna03083 Polycomb repressive complex 6
bna03013 Nucleocytoplasmic transport 3
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot03013 Nucleocytoplasmic transport 2
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123121357 123103569 123111793 123395025 100825336 4346861 103632647 8055579 816462 100820024 100806423 101264535 103828298 100244028 18101254 107899953 107895807 106352952 106390005 102594146 102619392 107777567 107787142 5728790
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