ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123122711	uncharacterized LOC123122711
tae-r.2	123105330	uncharacterized LOC123105330
tae-r.2	123104897	uncharacterized LOC123104897
tae-r.2	123113188	uncharacterized LOC123113188
hvu-r.1	123397204	protein IQ-DOMAIN 5-like
hvu-r.1	123452099	uncharacterized LOC123452099
bdi-r.1	100825689	uncharacterized LOC100825689
osa-u.5	4333576	uncharacterized LOC4333576
zma-u.5	100283623	uncharacterized LOC100283623
zma-u.5	100273005	expp1 protein
zma-u.5	100281966	expp1 protein
sbi-r.1	8062204	uncharacterized LOC8062204
sbi-r.1	8083910	uncharacterized LOC8083910
ath-u.5	AT2G15910	CSL zinc finger domain-containing protein
ath-u.5	AT3G11800	Expp1 protein
ath-u.5	AT3G44150	Expp1 protein
gma-u.5	100807300	uncharacterized LOC100807300
gma-u.5	100813820	uncharacterized LOC100813820
gma-u.5	100814491	uncharacterized LOC100814491
sly-u.5	101246776	uncharacterized LOC101246776
sly-u.5	101250348	uncharacterized LOC101250348
bra-r.6	103870308	uncharacterized LOC103870308
bra-r.6	103848053	uncharacterized LOC103848053
bra-r.6	103859409	uncharacterized LOC103859409
vvi-u.5	100249592	uncharacterized LOC100249592
ppo-u.5	7469936	uncharacterized LOC7469936
ppo-u.5	7497652	uncharacterized LOC7497652
mtr-u.5	11412968	uncharacterized LOC11412968
mtr-u.5	11431189	uncharacterized LOC11431189
ghi-r.1	107925677	uncharacterized LOC107925677
ghi-r.1	107928218	uncharacterized LOC107928218
ghi-r.1	121228147	uncharacterized LOC121228147
bna-r.1	BNAA03G31950D	uncharacterized BNAA03G31950D
bna-r.1	106349369	uncharacterized LOC106349369
bna-r.1	106347692	uncharacterized LOC106347692
sot-r.1	102601073	uncharacterized LOC102601073
sot-r.1	102588286	uncharacterized LOC102588286
cit-r.1	102630770	uncharacterized LOC102630770
nta-r.1	107790292	uncharacterized LOC107790292
nta-r.1	107772566	uncharacterized LOC107772566
nta-r.1	107778721	uncharacterized LOC107778721
cre-r.1	CHLRE_06g287800v5	uncharacterized protein

Top 50 coexpressed genes to 123122711 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123122711 (tae-r.2 coexpression data)

CoexMap"123122711"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0017183 [list] [network] protein histidyl modification to diphthamide

(28 genes)

IEA

GO CC

GO:0005829 [list] [network] cytosol

(2324 genes)

IEA

GO MF

GO:0046872 [list] [network] metal ion binding

(7531 genes)

IEA

Protein

XP_044398969.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 8, plas 1, E.R._plas 1

(predict for XP_044398969.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_044398969.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123122711	tae-r.2 for 123105330	tae-r.2 for 123104897	tae-r.2 for 123113188	hvu-r.1 for 123397204	hvu-r.1 for 123452099	bdi-r.1 for 100825689	osa-u.5 for 4333576	zma-u.5 for 100283623	zma-u.5 for 100273005	zma-u.5 for 100281966	sbi-r.1 for 8062204	sbi-r.1 for 8083910	ath-u.5 for AT2G15910	ath-u.5 for AT3G11800	ath-u.5 for AT3G44150	gma-u.5 for 100807300	gma-u.5 for 100813820	gma-u.5 for 100814491	sly-u.5 for 101246776	sly-u.5 for 101250348	bra-r.6 for 103870308	bra-r.6 for 103848053	bra-r.6 for 103859409	vvi-u.5 for 100249592	ppo-u.5 for 7469936	ppo-u.5 for 7497652	mtr-u.5 for 11412968	mtr-u.5 for 11431189	ghi-r.1 for 107925677	ghi-r.1 for 107928218	ghi-r.1 for 121228147	bna-r.1 for BNAA03G31950D	bna-r.1 for 106349369	bna-r.1 for 106347692	sot-r.1 for 102601073	sot-r.1 for 102588286	cit-r.1 for 102630770	nta-r.1 for 107790292	nta-r.1 for 107772566	nta-r.1 for 107778721	cre-r.1 for CHLRE_06g287800v5

Ortholog

Ortholog ID: 2446

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC123122711

uncharacterized LOC123105330

uncharacterized LOC123104897

protein IQ-DOMAIN 5-like

uncharacterized LOC123452099

uncharacterized LOC100825689

uncharacterized LOC4333576

uncharacterized LOC100283623

expp1 protein

uncharacterized LOC8062204

uncharacterized LOC8083910

CSL zinc finger domain-containing protein

Expp1 protein

uncharacterized LOC100807300

uncharacterized LOC100818051

uncharacterized LOC100795287

uncharacterized LOC101246776

uncharacterized LOC101250348

uncharacterized LOC103870308

uncharacterized LOC103848053

uncharacterized LOC103859409

uncharacterized LOC100249592

uncharacterized LOC7469936

uncharacterized LOC7497652

uncharacterized LOC11412968

uncharacterized LOC11431189

uncharacterized LOC107928218

uncharacterized LOC121228147

uncharacterized LOC106349369

uncharacterized LOC106452500

uncharacterized LOC106418500

uncharacterized LOC102601073

uncharacterized LOC102588286

uncharacterized LOC102630770

uncharacterized LOC107772566

uncharacterized LOC107778721

uncharacterized LOC107773105

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	8
tae04517	IgSF CAM signaling	8
tae04814	Motor proteins	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	2
tae04517	IgSF CAM signaling	2
tae04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00670	One carbon pool by folate	4
bdi00270	Cysteine and methionine metabolism	3
bdi01230	Biosynthesis of amino acids	3
bdi00520	Amino sugar and nucleotide sugar metabolism	3
bdi01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04814	Motor proteins	6
osa04145	Phagosome	4
osa04517	IgSF CAM signaling	4
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	6
zma00510	N-Glycan biosynthesis	2
zma00513	Various types of N-glycan biosynthesis	2
zma04141	Protein processing in endoplasmic reticulum	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00510	N-Glycan biosynthesis	2
zma00513	Various types of N-glycan biosynthesis	2
zma04141	Protein processing in endoplasmic reticulum	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03083	Polycomb repressive complex	2
sbi04120	Ubiquitin mediated proteolysis	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	2
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00030	Pentose phosphate pathway	2
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly04145	Phagosome	6
sly04142	Lysosome	5
sly04626	Plant-pathogen interaction	3
sly04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00061	Fatty acid biosynthesis	4
bra01212	Fatty acid metabolism	4
bra00780	Biotin metabolism	3
bra01240	Biosynthesis of cofactors	3
bra00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	5
bra04145	Phagosome	5
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	3
vvi04142	Lysosome	2
vvi04145	Phagosome	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	3
ppo04145	Phagosome	3
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	2
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	7
ghi04144	Endocytosis	3
ghi00511	Other glycan degradation	2
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	4
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00908	Zeatin biosynthesis	3
sot00960	Tropane, piperidine and pyridine alkaloid biosynthesis	3
sot00220	Arginine biosynthesis	2
sot00250	Alanine, aspartate and glutamate metabolism	2
sot00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	4
sot04142	Lysosome	4
sot04145	Phagosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03272	Virion - Hepatitis viruses	2
cit04144	Endocytosis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2
nta04142	Lysosome	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	5
nta04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	6
cre03272	Virion - Hepatitis viruses	3
cre03250	Viral life cycle - HIV-1	2

Expression

Expression pattern

Entrez Gene ID^*

123122711

123105330

123104897

123397204

123452099

100825689

4333576

100283623

100273005

100281966

8062204

8083910

816087

820353

100807300

100818051

100795287

101246776

101250348

103870308

103848053

103859409

100249592

7469936

7497652

11412968

11431189

107928218

121228147

106349369

106452500

106418500

102601073

102588286

102630770

107772566

107778721

107773105

5721042

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Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	1	1	3	2	3	3	2	3	1	2	2	3	3	2	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123122711 (tae-r.2 coexpression data)

Top 50 enrichment test to 123122711 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**