ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123156827	uncharacterized LOC123156827
tae-r.2	123120692	uncharacterized LOC123120692
tae-r.2	123061040	uncharacterized LOC123061040
hvu-r.1	123409059	uncharacterized LOC123409059
hvu-r.1	123401315	uncharacterized LOC123401315
bdi-r.1	100823885	uncharacterized LOC100823885
bdi-r.1	100825830	uncharacterized LOC100825830
bdi-r.1	100830187	uncharacterized LOC100830187
osa-u.5	4346417	uncharacterized LOC4346417
osa-u.5	4341635	uncharacterized LOC4341635
osa-u.5	107277719	uncharacterized LOC107277719
zma-u.5	100283432	uncharacterized LOC100283432
zma-u.5	100282879	uncharacterized LOC100282879
zma-u.5	100282112	uncharacterized LOC100282112
sbi-r.1	8058395	uncharacterized LOC8058395
sbi-r.1	8077638	uncharacterized LOC8077638
ath-u.5	AT5G32440	Ubiquitin system component Cue protein
ath-u.5	AT1G80040	ubiquitin system component Cue
gma-u.5	100813137	uncharacterized LOC100813137
gma-u.5	100809549	CUE domain-containing protein
gma-u.5	100791728	uncharacterized LOC100791728
sly-u.5	101267420	uncharacterized LOC101267420
sly-u.5	101260308	uncharacterized LOC101260308
bra-r.6	103835274	plectin
bra-r.6	103853284	uncharacterized LOC103853284
bra-r.6	103840480	uncharacterized LOC103840480
vvi-u.5	100250980	uncharacterized LOC100250980
vvi-u.5	100247807	uncharacterized LOC100247807
vvi-u.5	100250952	uncharacterized LOC100250952
ppo-u.5	7459876	uncharacterized LOC7459876
ppo-u.5	7474679	uncharacterized LOC7474679
ppo-u.5	18099262	uncharacterized LOC18099262
mtr-u.5	11430702	uncharacterized LOC11430702
mtr-u.5	11420503	uncharacterized LOC11420503
ghi-r.1	107889703	uncharacterized LOC107889703
ghi-r.1	107891039	uncharacterized LOC107891039
ghi-r.1	107926849	uncharacterized LOC107926849
bna-r.1	BNAC05G22510D	uncharacterized BNAC05G22510D
bna-r.1	106353354	uncharacterized LOC106353354
bna-r.1	106356311	uncharacterized LOC106356311
sot-r.1	102595974	uncharacterized LOC102595974
sot-r.1	102579952	uncharacterized LOC102579952
sot-r.1	102598976	uncharacterized LOC102598976
cit-r.1	102627853	hypothetical protein
cit-r.1	102621858	hypothetical protein
cit-r.1	102617708	uncharacterized LOC102617708
nta-r.1	107801106	uncharacterized LOC107801106
nta-r.1	107828424	uncharacterized LOC107828424
nta-r.1	107832637	uncharacterized LOC107832637
cre-r.1	CHLRE_11g480000v5	uncharacterized protein

Top 50 coexpressed genes to 123156827 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123156827 (tae-r.2 coexpression data)

CoexMap"123123508"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044399963.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 7, chlo 1, nucl 1

(predict for XP_044399963.1)

Subcellular
localization
TargetP

other 9

(predict for XP_044399963.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123156827	tae-r.2 for 123120692	tae-r.2 for 123061040	hvu-r.1 for 123409059	hvu-r.1 for 123401315	bdi-r.1 for 100823885	bdi-r.1 for 100825830	bdi-r.1 for 100830187	osa-u.5 for 4346417	osa-u.5 for 4341635	osa-u.5 for 107277719	zma-u.5 for 100283432	zma-u.5 for 100282879	zma-u.5 for 100282112	sbi-r.1 for 8058395	sbi-r.1 for 8077638	ath-u.5 for AT5G32440	ath-u.5 for AT1G80040	gma-u.5 for 100813137	gma-u.5 for 100809549	gma-u.5 for 100791728	sly-u.5 for 101267420	sly-u.5 for 101260308	bra-r.6 for 103835274	bra-r.6 for 103853284	bra-r.6 for 103840480	vvi-u.5 for 100250980	vvi-u.5 for 100247807	vvi-u.5 for 100250952	ppo-u.5 for 7459876	ppo-u.5 for 7474679	ppo-u.5 for 18099262	mtr-u.5 for 11430702	mtr-u.5 for 11420503	ghi-r.1 for 107889703	ghi-r.1 for 107891039	ghi-r.1 for 107926849	bna-r.1 for BNAC05G22510D	bna-r.1 for 106353354	bna-r.1 for 106356311	sot-r.1 for 102595974	sot-r.1 for 102579952	sot-r.1 for 102598976	cit-r.1 for 102627853	cit-r.1 for 102621858	cit-r.1 for 102617708	nta-r.1 for 107801106	nta-r.1 for 107828424	nta-r.1 for 107832637	cre-r.1 for CHLRE_11g480000v5

Ortholog

Ortholog ID: 1046

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC123136522

uncharacterized LOC123165704

uncharacterized LOC123149578

uncharacterized LOC123401315

uncharacterized LOC123397644

uncharacterized LOC100823885

uncharacterized LOC100825830

uncharacterized LOC4346417

uncharacterized LOC9272364

uncharacterized LOC4328528

uncharacterized LOC100283432

uncharacterized LOC100282879

uncharacterized LOC100282112

uncharacterized LOC8058395

uncharacterized LOC8077638

Ubiquitin system component Cue protein

ubiquitin system component Cue

uncharacterized LOC100813137

CUE domain-containing protein

uncharacterized LOC100815998

uncharacterized LOC101260308

uncharacterized LOC101249446

plectin

uncharacterized LOC103840480

uncharacterized LOC103830415

uncharacterized LOC100250980

uncharacterized LOC100247807

uncharacterized LOC100250952

uncharacterized LOC7459876

uncharacterized LOC7474679

uncharacterized LOC18099262

uncharacterized LOC11430702

uncharacterized LOC11420503

uncharacterized LOC107889703

uncharacterized LOC107926849

uncharacterized LOC121225223

uncharacterized LOC106356311

plectin-like

uncharacterized BNAC07G09870D

uncharacterized LOC102595974

uncharacterized LOC102598976

uncharacterized LOC102603478

hypothetical protein

uncharacterized LOC102617708

uncharacterized LOC107801106

uncharacterized LOC107766032

uncharacterized LOC107786812

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00340	Histidine metabolism	3
tae00350	Tyrosine metabolism	3
tae00360	Phenylalanine metabolism	3
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
tae00960	Tropane, piperidine and pyridine alkaloid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	3
hvu03420	Nucleotide excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	4
bdi00330	Arginine and proline metabolism	3
bdi00510	N-Glycan biosynthesis	3
bdi00513	Various types of N-glycan biosynthesis	3
bdi00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	3
bdi00230	Purine metabolism	2
bdi00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03020	RNA polymerase	4
osa03420	Nucleotide excision repair	4
osa03040	Spliceosome	2
osa03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00240	Pyrimidine metabolism	2
osa01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	6
zma03015	mRNA surveillance pathway	4
zma00513	Various types of N-glycan biosynthesis	4
zma00510	N-Glycan biosynthesis	3
zma00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00600	Sphingolipid metabolism	2
ath04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma04141	Protein processing in endoplasmic reticulum	3
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	3
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	3
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	4
ghi03272	Virion - Hepatitis viruses	2
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi00510	N-Glycan biosynthesis	2
ghi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	4
sot04136	Autophagy - other	4
sot04382	Cornified envelope formation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00220	Arginine biosynthesis	2
sot01210	2-Oxocarboxylic acid metabolism	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	6
nta04142	Lysosome	5
nta04016	MAPK signaling pathway - plant	4
nta04075	Plant hormone signal transduction	4
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

123136522

123165704

123149578

123401315

123397644

100823885

100825830

4346417

9272364

4328528

100283432

100282879

100282112

8058395

8077638

833203

844344

100813137

100809549

100815998

101260308

101249446

103835274

103840480

103830415

100250980

100247807

100250952

7459876

7474679

18099262

11430702

11420503

107889703

107926849

121225223

106356311

106361650

106376800

102595974

102598976

102603478

102627853

102621858

102617708

107801106

107766032

107786812

66055339

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	2	3	3	3	2	2	3	2	3	3	3	2	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123156827 (tae-r.2 coexpression data)

Top 50 enrichment test to 123156827 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**