ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123123935	TSET complex member tstD
osa-u.5	4334836	uncharacterized LOC4334836
zma-u.5	100193319	uncharacterized LOC100193319
ath-u.5	AT1G15370	SNARE-like superfamily protein
gma-u.5	100305755	uncharacterized LOC100305755
gma-u.5	100781055	TSET complex member tstD
gma-u.5	100306313	uncharacterized LOC100306313
sly-u.5	101247418	uncharacterized LOC101247418
sly-u.5	101263822	uncharacterized LOC101263822
vvi-u.5	100245686	uncharacterized LOC100245686
ppo-u.5	7475120	uncharacterized LOC7475120
mtr-u.5	11433582	TSET complex member tstD

functional annotation

KEGG

GO BP

GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport	(115 genes)	IEA
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	(117 genes)	IEA
GO:0006886 [list] [network] intracellular protein transport	(789 genes)	IEA

GO CC

GO:0030126 [list] [network] COPI vesicle coat

(80 genes)

IEA

GO MF

Protein

XP_044400524.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, nucl 1, cysk 1, golg 1, cysk_nucl 1

(predict for XP_044400524.1)

Subcellular
localization
TargetP

other 4

(predict for XP_044400524.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123123935	osa-u.5 for 4334836	zma-u.5 for 100193319	ath-u.5 for AT1G15370	gma-u.5 for 100305755	gma-u.5 for 100781055	gma-u.5 for 100306313	sly-u.5 for 101247418	sly-u.5 for 101263822	vvi-u.5 for 100245686	ppo-u.5 for 7475120	mtr-u.5 for 11433582

Ortholog ID: 4816

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100037555

uncharacterized LOC123397456

pentatricopeptide repeat-containing protein At5g46580, chloroplastic

uncharacterized LOC4334836

uncharacterized LOC100193319

uncharacterized LOC8059257

SNARE-like superfamily protein

uncharacterized LOC100305755

uncharacterized LOC100306313

uncharacterized LOC101247418

TSET complex member tstD

uncharacterized LOC100245686

uncharacterized LOC7475120

TSET complex member tstD

uncharacterized LOC107918901

TSET complex member tstD

uncharacterized LOC102596407

uncharacterized LOC102627195

uncharacterized LOC107772431

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	6
zma04144	Endocytosis	4
zma05100	Bacterial invasion of epithelial cells	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	3
ath04130	SNARE interactions in vesicular transport	2
ath04141	Protein processing in endoplasmic reticulum	2
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00020	Citrate cycle (TCA cycle)	4
gma01200	Carbon metabolism	4
gma01210	2-Oxocarboxylic acid metabolism	4
gma04144	Endocytosis	4
gma00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00020	Citrate cycle (TCA cycle)	4
gma01200	Carbon metabolism	4
gma01210	2-Oxocarboxylic acid metabolism	4
gma00785	Lipoic acid metabolism	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3
bra04141	Protein processing in endoplasmic reticulum	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	2
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	4
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	2
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	2
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	3
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	3
cit03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	2
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

100037555

123397456

100844620

4334836

100193319

8059257

838106

100305755

100306313

101247418

103872328

103842900

100245686

7475120

11433582

107918901

106452234

106412108

102596407

102627195

107772431

5728682

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123123935 (tae-r.2 coexpression data)

Top 50 enrichment test to 123123935 (tae-r.2 coexpression data)


Species	tae	osa	zma	ath	gma	sly	vvi	ppo	mtr	hvu	cit	bra	ghi	sbi	bdi	nta	bna	cre	sot
Paralog	1	1	1	1	3	2	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123123935 (tae-r.2 coexpression data)

Top 50 enrichment test to 123123935 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**