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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123128913   5' exonuclease Apollo 
 tae-r.2   123128914   5' exonuclease Apollo 
 tae-r.2   123139500   uncharacterized LOC123139500 
 tae-r.2   123071825   5' exonuclease Apollo 
 hvu-r.1   123445131   uncharacterized LOC123445131 
 bdi-r.1   100844720   uncharacterized LOC100844720 
 bdi-r.1   100821385   uncharacterized LOC100821385 
 osa-u.5   4324849   uncharacterized LOC4324849 
 osa-u.5   4344459   uncharacterized LOC4344459 
 zma-u.5   103650919   protein artemis 
 zma-u.5   103630466   uncharacterized LOC103630466 
 sbi-r.1   8063135   protein artemis 
 ath-u.5   AT1G19025   DNA repair metallo-beta-lactamase family protein 
 gma-u.5   100807948   5' exonuclease Apollo 
 sly-u.5   101250070   uncharacterized LOC101250070 
 bra-r.6   103842667   DNA cross-link repair 1A protein 
 vvi-u.5   100254013   uncharacterized LOC100254013 
 ppo-u.5   7466733   uncharacterized LOC7466733 
 mtr-u.5   11423063   5' exonuclease Apollo 
 ghi-r.1   107961415   5' exonuclease Apollo 
 ghi-r.1   107959606   uncharacterized LOC107959606 
 ghi-r.1   107959478   uncharacterized LOC107959478 
 bna-r.1   106368901   5' exonuclease Apollo 
 bna-r.1   106369083   DNA cross-link repair 1A protein-like 
 sot-r.1   102606437   5' exonuclease Apollo 
 cit-r.1   102608159   uncharacterized LOC102608159 
 nta-r.1   107823033   uncharacterized LOC107823033 
 nta-r.1   107786558   uncharacterized LOC107786558 
 cre-r.1   CHLRE_01g052950v5   uncharacterized protein 

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Top 50 coexpressed genes to 123128913 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123128913 (tae-r.2 coexpression data)

CoexMap"123128913"


taeLOC123128913 | Entrez gene ID : 123128913    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 2 2 2 1 1 1 1 1 1 1 1 3 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (39 genes)  IEA  
GO:0036297 [list] [network] interstrand cross-link repair  (59 genes)  IEA  
GO:0006508 [list] [network] proteolysis  (2985 genes)  IEA  
GO CC
GO MF
GO:0035312 [list] [network] 5'-3' DNA exonuclease activity  (26 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (104 genes)  IEA  
GO:0008234 [list] [network] cysteine-type peptidase activity  (774 genes)  IEA  
Protein XP_044404959.1 [sequence] [blastp]
XP_044404960.1 [sequence] [blastp]
XP_044404961.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  cysk 1  (predict for XP_044404959.1)
nucl 4,  cyto 4,  cysk 2,  nucl_plas 2  (predict for XP_044404960.1)
nucl 6,  chlo 1,  cyto 1  (predict for XP_044404961.1)
Subcellular
localization
TargetP
other 5  (predict for XP_044404959.1)
other 5  (predict for XP_044404960.1)
other 5  (predict for XP_044404961.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123128913
tae-r.2
for
123128914
tae-r.2
for
123139500
tae-r.2
for
123071825
hvu-r.1
for
123445131
bdi-r.1
for
100844720
bdi-r.1
for
100821385
osa-u.5
for
4324849
osa-u.5
for
4344459
zma-u.5
for
103650919
zma-u.5
for
103630466
sbi-r.1
for
8063135
ath-u.5
for
AT1G19025
gma-u.5
for
100807948
sly-u.5
for
101250070
bra-r.6
for
103842667
vvi-u.5
for
100254013
ppo-u.5
for
7466733
mtr-u.5
for
11423063
ghi-r.1
for
107961415
ghi-r.1
for
107959606
ghi-r.1
for
107959478
bna-r.1
for
106368901
bna-r.1
for
106369083
sot-r.1
for
102606437
cit-r.1
for
102608159
nta-r.1
for
107823033
nta-r.1
for
107786558
cre-r.1
for
CHLRE_01g052950v5


Ortholog ID: 6703
Species tae tae tae hvu bdi bdi osa osa zma zma sbi ath gma sly bra vvi ppo mtr ghi ghi ghi bna bna sot cit nta nta cre
Symbol LOC123128913 LOC123128914 LOC123071825 LOC123445131 LOC100844720 LOC100821385 LOC4324849 LOC4344459 LOC103650919 LOC103630466 LOC8063135 AT1G19025 LOC100807948 LOC101250070 LOC103842667 LOC100254013 LOC7466733 LOC11423063 LOC107961415 LOC107959606 LOC107959478 LOC106368901 LOC106369083 LOC102606437 LOC102608159 LOC107823033 LOC107786558 CHLRE_01g052950v5
Function* 5' exonuclease Apollo 5' exonuclease Apollo 5' exonuclease Apollo uncharacterized LOC123445131 uncharacterized LOC100844720 uncharacterized LOC100821385 uncharacterized LOC4324849 uncharacterized LOC4344459 protein artemis uncharacterized LOC103630466 protein artemis DNA repair metallo-beta-lactamase family protein 5' exonuclease Apollo uncharacterized LOC101250070 DNA cross-link repair 1A protein uncharacterized LOC100254013 uncharacterized LOC7466733 5' exonuclease Apollo 5' exonuclease Apollo uncharacterized LOC107959606 uncharacterized LOC107959478 5' exonuclease Apollo DNA cross-link repair 1A protein-like 5' exonuclease Apollo uncharacterized LOC102608159 uncharacterized LOC107823033 uncharacterized LOC107786558 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 5
bdi03410 Base excision repair 2
bdi03420 Nucleotide excision repair 2
bdi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 6
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi01200 Carbon metabolism 2
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo00190 Oxidative phosphorylation 2
ppo04142 Lysosome 2
ppo04145 Phagosome 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit00020 Citrate cycle (TCA cycle) 2
cit00785 Lipoic acid metabolism 2
cit01200 Carbon metabolism 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 4
nta00073 Cutin, suberine and wax biosynthesis 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00052 Galactose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123128913 123128914 123071825 123445131 100844720 100821385 4324849 4344459 103650919 103630466 8063135 838484 100807948 101250070 103842667 100254013 7466733 11423063 107961415 107959606 107959478 106368901 106369083 102606437 102608159 107823033 107786558 5715786
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