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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123127489   DNA repair protein XRCC3 homolog 
 hvu-r.1   123404013   DNA repair protein XRCC3 homolog 
 bdi-r.1   100831144   DNA repair protein XRCC3 homolog 
 osa-u.5   4329686   DNA repair protein XRCC3 homolog 
 zma-u.5   103627300   DNA repair protein XRCC3 homolog 
 sbi-r.1   8068904   DNA repair protein XRCC3 homolog 
 mtr-u.5   25488274   DNA repair protein XRCC3 homolog 
 ghi-r.1   107942737   DNA repair protein XRCC3 homolog 
 ghi-r.1   107903316   DNA repair protein XRCC3 homolog 
 cit-r.1   102607526   DNA repair protein XRCC3 homolog 
 nta-r.1   107819394   DNA repair protein XRCC3 homolog 
 nta-r.1   107831770   DNA repair protein XRCC3 homolog 
 cre-r.1   CHLRE_06g278151v5   uncharacterized protein 

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Top 50 coexpressed genes to 123127489 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123127489 (tae-r.2 coexpression data)

CoexMap"123134150"


taeLOC123134150 | Entrez gene ID : 123134150    
Species tae hvu bdi osa zma sbi mtr ghi cit nta cre vvi sot bra ppo sly ath gma bna
Paralog 1 1 1 1 1 1 1 2 1 2 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03440 [list] [network] Homologous recombination (198 genes)
GO BP
GO:0071140 [list] [network] resolution of mitotic recombination intermediates  (3 genes)  IEA  
GO:0090656 [list] [network] t-circle formation  (3 genes)  IEA  
GO:0000722 [list] [network] telomere maintenance via recombination  (8 genes)  IEA  
GO:0045003 [list] [network] double-strand break repair via synthesis-dependent strand annealing  (18 genes)  IEA  
GO CC
GO:0033065 [list] [network] Rad51C-XRCC3 complex  (6 genes)  IEA  
GO:0005657 [list] [network] replication fork  (142 genes)  IEA  
GO MF
GO:0000400 [list] [network] four-way junction DNA binding  (16 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (73 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
Protein XP_044409401.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_044409401.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_044409401.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123127489
hvu-r.1
for
123404013
bdi-r.1
for
100831144
osa-u.5
for
4329686
zma-u.5
for
103627300
sbi-r.1
for
8068904
mtr-u.5
for
25488274
ghi-r.1
for
107942737
ghi-r.1
for
107903316
cit-r.1
for
102607526
nta-r.1
for
107819394
nta-r.1
for
107831770
cre-r.1
for
CHLRE_06g278151v5


Ortholog ID: 11005
Species tae hvu bdi osa zma sbi mtr ghi ghi cit nta nta cre
Symbol LOC123127489 LOC123404013 LOC100831144 LOC4329686 LOC103627300 LOC8068904 LOC25488274 LOC107942737 LOC107903316 LOC102607526 LOC107819394 LOC107831770 CHLRE_06g278151v5
Function* DNA repair protein XRCC3 homolog DNA repair protein XRCC3 homolog DNA repair protein XRCC3 homolog DNA repair protein XRCC3 homolog DNA repair protein XRCC3 homolog DNA repair protein XRCC3 homolog DNA repair protein XRCC3 homolog DNA repair protein XRCC3 homolog DNA repair protein XRCC3 homolog DNA repair protein XRCC3 homolog DNA repair protein XRCC3 homolog DNA repair protein XRCC3 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 4
ghi04517 IgSF CAM signaling 4
ghi04814 Motor proteins 4
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 4
ghi04517 IgSF CAM signaling 4
ghi04814 Motor proteins 4
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta00230 Purine metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta00230 Purine metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123127489 123404013 100831144 4329686 103627300 8068904 25488274 107942737 107903316 102607526 107819394 107831770 66053696
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