ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123135753	protein YIPF1 homolog
tae-r.2	123058709	protein YIPF1 homolog
tae-r.2	123061451	protein YIPF1 homolog
tae-r.2	123070095	protein YIPF1 homolog
hvu-r.1	123445603	protein YIPF1 homolog
hvu-r.1	123443858	protein YIPF1 homolog
bdi-r.1	100821301	protein YIPF1 homolog
bdi-r.1	100821203	protein YIPF1 homolog
osa-u.5	4338982	uncharacterized LOC4338982
osa-u.5	4327734	uncharacterized LOC4327734
zma-u.5	100194180	uncharacterized LOC100194180
zma-u.5	100274373	uncharacterized LOC100274373
zma-u.5	100193527	uncharacterized LOC100193527
sbi-r.1	8061757	protein YIPF1 homolog
sbi-r.1	8084812	protein YIPF1 homolog
ath-u.5	AT2G39805	Integral membrane Yip1 family protein
ath-u.5	AT3G05280	Integral membrane Yip1 family protein
ath-u.5	AT5G27490	Integral membrane Yip1 family protein
gma-u.5	100780622	protein YIPF1 homolog
gma-u.5	100813483	protein YIPF1 homolog
sly-u.5	101250218	uncharacterized LOC101250218
sly-u.5	101263468	uncharacterized LOC101263468
bra-r.6	103865747	protein YIPF1 homolog
bra-r.6	103848998	protein YIPF1 homolog
vvi-u.5	100266603	uncharacterized LOC100266603
vvi-u.5	100249608	uncharacterized LOC100249608
ppo-u.5	7458116	uncharacterized LOC7458116
ppo-u.5	7473296	uncharacterized LOC7473296
ppo-u.5	7487980	uncharacterized LOC7487980
mtr-u.5	11413778	protein YIPF1 homolog
mtr-u.5	11422593	protein YIPF1 homolog
mtr-u.5	11434181	protein YIPF1 homolog
ghi-r.1	121229561	protein YIPF1 homolog
ghi-r.1	107893276	protein YIPF1 homolog
ghi-r.1	107897310	protein YIPF1 homolog
bna-r.1	125587971	protein YIPF1 homolog
bna-r.1	106435738	protein YIPF1 homolog
bna-r.1	125590384	protein YIPF1 homolog
sot-r.1	102593708	protein YIPF1 homolog
sot-r.1	102580575	protein YIPF1 homolog
cit-r.1	102615988	uncharacterized LOC102615988
cit-r.1	102609417	uncharacterized LOC102609417
nta-r.1	107812454	uncharacterized LOC107812454
nta-r.1	107788889	uncharacterized LOC107788889
nta-r.1	107798296	uncharacterized LOC107798296
cre-r.1	CHLRE_17g722700v5	uncharacterized protein

Top 50 coexpressed genes to 123135753 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123135753 (tae-r.2 coexpression data)

CoexMap"123135753"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0016192 [list] [network] vesicle-mediated transport

(1129 genes)

IEA

GO CC

GO:0005794 [list] [network] Golgi apparatus	(1208 genes)	IEA
GO:0016020 [list] [network] membrane	(10843 genes)	IEA

GO MF

GO:0031267 [list] [network] small GTPase binding

(115 genes)

IEA

Protein

XP_044410896.1 [sequence] [blastp]
XP_044410904.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, chlo 2, cyto_plas 2, mito 1, plas 1, vacu 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_044410896.1)
cyto 3, chlo 2, cyto_plas 2, mito 1, plas 1, vacu 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_044410904.1)

Subcellular
localization
TargetP

other 7	(predict for XP_044410896.1)
other 7	(predict for XP_044410904.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123135753	tae-r.2 for 123058709	tae-r.2 for 123061451	tae-r.2 for 123070095	hvu-r.1 for 123445603	hvu-r.1 for 123443858	bdi-r.1 for 100821301	bdi-r.1 for 100821203	osa-u.5 for 4338982	osa-u.5 for 4327734	zma-u.5 for 100194180	zma-u.5 for 100274373	zma-u.5 for 100193527	sbi-r.1 for 8061757	sbi-r.1 for 8084812	ath-u.5 for AT2G39805	ath-u.5 for AT3G05280	ath-u.5 for AT5G27490	gma-u.5 for 100780622	gma-u.5 for 100813483	sly-u.5 for 101250218	sly-u.5 for 101263468	bra-r.6 for 103865747	bra-r.6 for 103848998	vvi-u.5 for 100266603	vvi-u.5 for 100249608	ppo-u.5 for 7458116	ppo-u.5 for 7473296	ppo-u.5 for 7487980	mtr-u.5 for 11413778	mtr-u.5 for 11422593	mtr-u.5 for 11434181	ghi-r.1 for 121229561	ghi-r.1 for 107893276	ghi-r.1 for 107897310	bna-r.1 for 125587971	bna-r.1 for 106435738	bna-r.1 for 125590384	sot-r.1 for 102593708	sot-r.1 for 102580575	cit-r.1 for 102615988	cit-r.1 for 102609417	nta-r.1 for 107812454	nta-r.1 for 107788889	nta-r.1 for 107798296	cre-r.1 for CHLRE_17g722700v5

Ortholog

Ortholog ID: 1795

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

protein YIPF1 homolog

uncharacterized LOC4338982

uncharacterized LOC4327734

uncharacterized LOC100194180

uncharacterized LOC100274373

uncharacterized LOC100193527

protein YIPF1 homolog

Integral membrane Yip1 family protein

protein YIPF1 homolog

uncharacterized LOC101250218

uncharacterized LOC101263468

protein YIPF1 homolog

uncharacterized LOC100266603

uncharacterized LOC100249608

uncharacterized LOC7458116

uncharacterized LOC7473296

uncharacterized LOC18098793

protein YIPF1 homolog

uncharacterized LOC102615988

uncharacterized LOC102609417

uncharacterized LOC107812454

uncharacterized LOC107788889

uncharacterized LOC107798296

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	3
tae00040	Pentose and glucuronate interconversions	3
tae00053	Ascorbate and aldarate metabolism	3
tae00561	Glycerolipid metabolism	3
tae00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	2
tae04136	Autophagy - other	2
tae04382	Cornified envelope formation	2
tae04141	Protein processing in endoplasmic reticulum	2
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3
hvu04141	Protein processing in endoplasmic reticulum	2
hvu03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00510	N-Glycan biosynthesis	2
bdi00513	Various types of N-glycan biosynthesis	2
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03060	Protein export	3
bdi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	3
osa03015	mRNA surveillance pathway	3
osa03060	Protein export	3
osa00513	Various types of N-glycan biosynthesis	2
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2
zma00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	4
sbi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	3
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3
ath00510	N-Glycan biosynthesis	2
ath00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	6
gma00190	Oxidative phosphorylation	5
gma04142	Lysosome	4
gma04144	Endocytosis	2
gma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	3
gma04142	Lysosome	2
gma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03060	Protein export	2
sly04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	4
bra00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	4
bra04142	Lysosome	3
bra05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	3
vvi00190	Oxidative phosphorylation	2
vvi04144	Endocytosis	2
vvi04130	SNARE interactions in vesicular transport	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	3
ppo00190	Oxidative phosphorylation	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00240	Pyrimidine metabolism	2
mtr01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03060	Protein export	3
sot04141	Protein processing in endoplasmic reticulum	2
sot00440	Phosphonate and phosphinate metabolism	2
sot00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3
cit04145	Phagosome	3
cit04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	4

Expression

Expression pattern

Entrez Gene ID^*

123135753

123058709

123078543

123445603

123443858

100821301

100821203

4338982

4327734

100194180

100274373

100193527

8061757

8084812

818567

819692

832808

100780622

100818738

100810521

101250218

101263468

103848998

103870835

100266603

100249608

7458116

7473296

18098793

11413778

11422593

11434181

107893276

107935334

121207812

125587971

111214113

106391558

102593708

102580575

102615988

102609417

107812454

107788889

107798296

5722716

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	2	2	3	2	3	2	2	2	2	3	3	3	3	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123135753 (tae-r.2 coexpression data)

Top 50 enrichment test to 123135753 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**