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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   104583471   pentatricopeptide repeat-containing protein At2g02750 
 bra-r.6   103839438   pentatricopeptide repeat-containing protein At2g02750 
 mtr-u.5   11412762   pentatricopeptide repeat-containing protein At2g02750 
 ghi-r.1   107894074   pentatricopeptide repeat-containing protein At2g02750 
 ghi-r.1   107918474   pentatricopeptide repeat-containing protein At2g02750 
 bna-r.1   106391687   pentatricopeptide repeat-containing protein At2g02750 
 bna-r.1   106416777   pentatricopeptide repeat-containing protein At2g02750 
 sot-r.1   102597508   pentatricopeptide repeat-containing protein At2g02750 
 cit-r.1   102609212   pentatricopeptide repeat-containing protein At2g02750 
 nta-r.1   107807869   pentatricopeptide repeat-containing protein At2g02750-like 
 nta-r.1   107821313   pentatricopeptide repeat-containing protein At2g02750-like 

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Top 50 coexpressed genes to 104583471 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 104583471 (bdi-r.1 coexpression data)

CoexMap"123136959"


taeLOC123136959 | Entrez gene ID : 123136959    
Species bdi bra mtr ghi bna sot cit nta vvi sly osa tae ppo zma cre sbi gma ath hvu
Paralog 1 1 1 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044412418.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  nucl 1,  E.R. 1  (predict for XP_044412418.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_044412418.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
104583471
bra-r.6
for
103839438
mtr-u.5
for
11412762
ghi-r.1
for
107894074
ghi-r.1
for
107918474
bna-r.1
for
106391687
bna-r.1
for
106416777
sot-r.1
for
102597508
cit-r.1
for
102609212
nta-r.1
for
107807869
nta-r.1
for
107821313


Ortholog ID: 12880
Species bdi bra mtr ghi ghi bna bna sot cit nta nta
Symbol LOC104583471 LOC103839438 LOC11412762 LOC107894074 LOC107918474 LOC106391687 LOC106416777 LOC102597508 LOC102609212 LOC107807869 LOC107821313
Function* pentatricopeptide repeat-containing protein At2g02750 pentatricopeptide repeat-containing protein At2g02750 pentatricopeptide repeat-containing protein At2g02750 pentatricopeptide repeat-containing protein At2g02750 pentatricopeptide repeat-containing protein At2g02750 pentatricopeptide repeat-containing protein At2g02750 pentatricopeptide repeat-containing protein At2g02750 pentatricopeptide repeat-containing protein At2g02750 pentatricopeptide repeat-containing protein At2g02750 pentatricopeptide repeat-containing protein At2g02750-like pentatricopeptide repeat-containing protein At2g02750-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi03018 RNA degradation 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi03018 RNA degradation 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit03040 Spliceosome 2
cit04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104583471 103839438 11412762 107894074 107918474 106391687 106416777 102597508 102609212 107807869 107821313
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