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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123138141   protein CURVATURE THYLAKOID 1A, chloroplastic 
 osa-u.5   4345635   protein CURVATURE THYLAKOID 1A, chloroplastic 
 osa-u.5   4330625   protein CURVATURE THYLAKOID 1A, chloroplastic 
 osa-u.5   4340704   protein CURVATURE THYLAKOID 1A, chloroplastic 
 zma-u.5   100282910   Threonine endopeptidase 
 zma-u.5   100276013   uncharacterized LOC100276013 
 zma-u.5   100273445   Threonine endopeptidase 
 ath-u.5   AT4G01150   CURVATURE THYLAKOID 1A-like protein 
 gma-u.5   100775367   protein CURVATURE THYLAKOID 1A, chloroplastic 
 gma-u.5   100305578   CAAD domain-containing protein 
 sly-u.5   101248140   protein CURVATURE THYLAKOID 1A, chloroplastic 
 sly-u.5   101260274   protein CURVATURE THYLAKOID 1A, chloroplastic-like 
 vvi-u.5   100253425   protein CURVATURE THYLAKOID 1A, chloroplastic 
 vvi-u.5   100246662   protein CURVATURE THYLAKOID 1A, chloroplastic 
 ppo-u.5   7492752   protein CURVATURE THYLAKOID 1A, chloroplastic 
 ppo-u.5   7457377   protein CURVATURE THYLAKOID 1A, chloroplastic 
 mtr-u.5   25499725   protein CURVATURE THYLAKOID 1A, chloroplastic 

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Top 50 coexpressed genes to 123138141 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123138141 (tae-r.2 coexpression data)

CoexMap"123138141"


taeLOC123138141 | Entrez gene ID : 123138141    
Species tae osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot bna ghi
Paralog 1 3 3 1 2 2 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (303 genes)  IEA  
GO:0009579 [list] [network] thylakoid  (497 genes)  IEA  
GO MF
Protein XP_044413985.1 [sequence] [blastp]
XP_044413986.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_044413985.1)
chlo 9  (predict for XP_044413986.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_044413985.1)
chlo 7  (predict for XP_044413986.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123138141

.
osa-u.5
for
4345635

.
osa-u.5
for
4330625

.
osa-u.5
for
4340704

.
zma-u.5
for
100282910

.
zma-u.5
for
100276013

.
zma-u.5
for
100273445

.
ath-u.5
for
AT4G01150

.
gma-u.5
for
100775367

.
gma-u.5
for
100305578

.
sly-u.5
for
101248140

.
sly-u.5
for
101260274

.
vvi-u.5
for
100253425

.
vvi-u.5
for
100246662

.
ppo-u.5
for
7492752

.
ppo-u.5
for
7457377

.
mtr-u.5
for
25499725

.


Ortholog ID: 3483
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol AT4G01150 LOC100305578 LOC100775367 LOC101248140 LOC101260274 LOC4345635 LOC4330625 LOC100282910 LOC100273445 LOC103853325 LOC117132370 LOC100246662 LOC100253425 LOC7457377 LOC7492752 LOC25499725 LOC123160120 LOC123150665 LOC123412295 LOC123402356 LOC107900934 LOC107955260 LOC106388745 LOC106398836 CHLRE_05g233950v5 LOC8065769 LOC102596366 LOC102595149 LOC102606616 LOC127901041 LOC100837661 LOC107820363 LOC107808435
Function* CURVATURE THYLAKOID 1A-like protein CAAD domain-containing protein protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic-like protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic Threonine endopeptidase Threonine endopeptidase protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic-like protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic uncharacterized protein protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic-like protein CURVATURE THYLAKOID 1A, chloroplastic-like protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic-like protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 13
ath00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 11
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 8
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 14
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 8
osa00196 Photosynthesis - antenna proteins 2
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 6
zma01200 Carbon metabolism 6
zma00010 Glycolysis / Gluconeogenesis 2
zma00030 Pentose phosphate pathway 2
zma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 9
zma00710 Carbon fixation by Calvin cycle 5
zma01200 Carbon metabolism 5
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 12
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 12
mtr00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 5
tae00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 7
tae00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 9
hvu00710 Carbon fixation by Calvin cycle 7
hvu00630 Glyoxylate and dicarboxylate metabolism 5
hvu00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 9
hvu00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 12
ghi00710 Carbon fixation by Calvin cycle 10
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 5
sbi01200 Carbon metabolism 5
sbi00196 Photosynthesis - antenna proteins 4
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot00010 Glycolysis / Gluconeogenesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00195 Photosynthesis 4
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00196 Photosynthesis - antenna proteins 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 6
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta03010 Ribosome 2
nta00860 Porphyrin metabolism 2
nta00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828181 100305578 100775367 101248140 101260274 4345635 4330625 100282910 100273445 103853325 117132370 100246662 100253425 7457377 7492752 25499725 123160120 123150665 123412295 123402356 107900934 107955260 106388745 106398836 5727729 8065769 102596366 102595149 102606616 127901041 100837661 107820363 107808435
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