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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5  AT5G03970  F-box associated ubiquitination effector family protein 
 gma-u.5  100810374  F-box protein At5g03970 
 bra-r.6  103847344  F-box protein At5g03970 
 bra-r.6  103842059  F-box protein At5g03970 
 ppo-u.5  18108062  F-box protein At5g03970 
 mtr-u.5  25499698  F-box protein At5g03970 
 ghi-r.1  107899172  F-box protein At5g03970 
 ghi-r.1  107895091  F-box protein At5g03970 
 bna-r.1  125592807  F-box protein At5g03970-like 
 bna-r.1  125592806  F-box protein At5g03970-like 
 bna-r.1  106433861  F-box protein At5g03970 
 cit-r.1  102624166  F-box protein At5g03970 

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Top 50 coexpressed genes to AT5G03970 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G03970 (ath-u.5 coexpression data)

CoexMap"123140967"


taeLOC123140967 | Entrez gene ID : 123140967
Species ath gma bra ppo mtr ghi bna cit osa nta bdi vvi sot tae sly zma hvu sbi cre
Paralog 1 1 2 1 1 2 3 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044416157.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo_mito 4,  nucl 2,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_044416157.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_044416157.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ath-u.5
for
AT5G03970


gma-u.5
for
100810374


bra-r.6
for
103847344


bra-r.6
for
103842059


ppo-u.5
for
18108062


mtr-u.5
for
25499698


ghi-r.1
for
107899172


ghi-r.1
for
107895091


bna-r.1
for
125592807


bna-r.1
for
125592806


bna-r.1
for
106433861


cit-r.1
for
102624166



Ortholog ID: 12922
Species ath gma bra bra ppo mtr ghi ghi bna bna cit
Symbol AT5G03970 LOC100810374 LOC103847344 LOC103842059 LOC18108062 LOC25499698 LOC107899172 LOC107895091 LOC106433861 LOC106372662 LOC102624166
Function* F-box associated ubiquitination effector family protein F-box protein At5g03970 F-box protein At5g03970 F-box protein At5g03970 F-box protein At5g03970 F-box protein At5g03970 F-box protein At5g03970 F-box protein At5g03970 F-box protein At5g03970 F-box protein At5g03970-like F-box protein At5g03970
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830276 100810374 103847344 103842059 18108062 25499698 107899172 107895091 106433861 106372662 102624166
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