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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123144197   serine/threonine-protein kinase Nek8 
 tae-r.2   123136717   ultraviolet-B receptor UVR8 
 tae-r.2   123132592   ultraviolet-B receptor UVR8 
 hvu-r.1   123402548   probable E3 ubiquitin-protein ligase HERC6 
 bdi-r.1   100825930   probable E3 ubiquitin-protein ligase HERC4 
 osa-u.5   4328622   ultraviolet-B receptor UVR8 
 zma-u.5   103654838   ultraviolet-B receptor UVR8 
 sbi-r.1   8082900   ultraviolet-B receptor UVR8 
 ath-u.5   RUG2   Regulator of chromosome condensation (RCC1) family protein 
 gma-u.5   100819916   probable E3 ubiquitin-protein ligase HERC3 
 sly-u.5   101253941   ultraviolet-B receptor UVR8 
 bra-r.6   103870445   RCC1 and BTB domain-containing protein 2 
 vvi-u.5   100247779   uncharacterized LOC100247779 
 mtr-u.5   11407542   ultraviolet-B receptor UVR8 
 ghi-r.1   107912487   ultraviolet-B receptor UVR8 
 ghi-r.1   107924706   RCC1 and BTB domain-containing protein 2 
 bna-r.1   106452618   ultraviolet-B receptor UVR8-like 
 bna-r.1   106452700   ultraviolet-B receptor UVR8 
 sot-r.1   102602323   ultraviolet-B receptor UVR8 
 cit-r.1   102623302   ultraviolet-B receptor UVR8 
 nta-r.1   107781329   ultraviolet-B receptor UVR8 
 nta-r.1   107813665   ultraviolet-B receptor UVR8 

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Top 50 coexpressed genes to 123144197 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123144197 (tae-r.2 coexpression data)

CoexMap"123144197"


taeLOC123144197 | Entrez gene ID : 123144197    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi mtr ghi bna sot cit nta ppo cre
Paralog 3 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (667 genes)  IEA  
Protein XP_044419184.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4  (predict for XP_044419184.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_044419184.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123144197
tae-r.2
for
123136717
tae-r.2
for
123132592
hvu-r.1
for
123402548
bdi-r.1
for
100825930
osa-u.5
for
4328622
zma-u.5
for
103654838
sbi-r.1
for
8082900
ath-u.5
for
RUG2
gma-u.5
for
100819916
sly-u.5
for
101253941
bra-r.6
for
103870445
vvi-u.5
for
100247779
mtr-u.5
for
11407542
ghi-r.1
for
107912487
ghi-r.1
for
107924706
bna-r.1
for
106452618
bna-r.1
for
106452700
sot-r.1
for
102602323
cit-r.1
for
102623302
nta-r.1
for
107781329
nta-r.1
for
107813665


Ortholog ID: 11439
Species tae tae tae hvu bdi osa zma sbi ath gma sly bra vvi mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123144197 LOC123136717 LOC123132592 LOC123402548 LOC100825930 LOC4328622 LOC103654838 LOC8082900 RUG2 LOC100819916 LOC101253941 LOC103870445 LOC100247779 LOC11407542 LOC107912487 LOC107924706 LOC106452618 LOC106452700 LOC102602323 LOC102623302 LOC107781329 LOC107813665
Function* serine/threonine-protein kinase Nek8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 probable E3 ubiquitin-protein ligase HERC6 probable E3 ubiquitin-protein ligase HERC4 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 Regulator of chromosome condensation (RCC1) family protein probable E3 ubiquitin-protein ligase HERC3 ultraviolet-B receptor UVR8 RCC1 and BTB domain-containing protein 2 uncharacterized LOC100247779 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 RCC1 and BTB domain-containing protein 2 ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 6
tae00620 Pyruvate metabolism 6
tae01200 Carbon metabolism 6
tae01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 9
osa00020 Citrate cycle (TCA cycle) 7
osa01210 2-Oxocarboxylic acid metabolism 5
osa00190 Oxidative phosphorylation 4
osa00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
bna03030 DNA replication 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 6
nta01240 Biosynthesis of cofactors 6
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 6
nta01240 Biosynthesis of cofactors 6
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123144197 123136717 123132592 123402548 100825930 4328622 103654838 8082900 834886 100819916 101253941 103870445 100247779 11407542 107912487 107924706 106452618 106452700 102602323 102623302 107781329 107813665
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