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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123144362   histone deacetylase 6 
 tae-r.2   123136940   histone deacetylase 6 
 tae-r.2   543173   histone deacetylase 6 
 hvu-r.1   123402944   histone deacetylase 6 
 bdi-r.1   100834631   histone deacetylase 6 
 osa-u.5   4345332   histone deacetylase 6 
 zma-u.5   HDA108   histone deacetylase 108 
 sbi-r.1   8073075   histone deacetylase 6 
 ath-u.5   HDA6   histone deacetylase 6 
 gma-u.5   HDA3   histone deacetylase 
 gma-u.5   HDA7   histone deacetylase 
 gma-u.5   HDA16   histone deacetylase 
 sly-u.5   101256864   histone deacetylase 6-like 
 sly-u.5   HDA3   histone deacetylase 
 bra-r.6   103873731   histone deacetylase 6 
 bra-r.6   103837453   histone deacetylase 6 
 vvi-u.5   100244903   histone deacetylase 6 
 ppo-u.5   7456903   histone deacetylase 6 
 ppo-u.5   7453794   histone deacetylase 6 
 mtr-u.5   11414050   histone deacetylase 6 
 ghi-r.1   107949697   histone deacetylase 6 
 ghi-r.1   107886255   histone deacetylase 6 
 bna-r.1   106347870   histone deacetylase 6 
 bna-r.1   106362718   histone deacetylase 6-like 
 bna-r.1   106411141   histone deacetylase 6-like 
 sot-r.1   102605718   histone deacetylase 6 
 sot-r.1   102587267   histone deacetylase 6-like 
 cit-r.1   102617679   histone deacetylase 6 
 nta-r.1   107828384   histone deacetylase 6-like 
 nta-r.1   107830951   histone deacetylase 6 

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Top 50 coexpressed genes to 123144362 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123144362 (tae-r.2 coexpression data)

CoexMap"123144362"


taeLOC123144362 | Entrez gene ID : 123144362    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 3 2 2 1 2 1 2 3 2 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03082 [list] [network] ATP-dependent chromatin remodeling (290 genes)
taes03083 [list] [network] Polycomb repressive complex (239 genes)
GO BP
GO:0040029 [list] [network] epigenetic regulation of gene expression  (238 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0004407 [list] [network] histone deacetylase activity  (43 genes)  IEA  
Protein XP_044419401.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 6,  cyto 2,  nucl 1,  E.R._vacu 1  (predict for XP_044419401.1)
Subcellular
localization
TargetP
other 6  (predict for XP_044419401.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123144362
tae-r.2
for
123136940
tae-r.2
for
543173
hvu-r.1
for
123402944
bdi-r.1
for
100834631
osa-u.5
for
4345332
zma-u.5
for
HDA108
sbi-r.1
for
8073075
ath-u.5
for
HDA6
gma-u.5
for
HDA3
gma-u.5
for
HDA7
gma-u.5
for
HDA16
sly-u.5
for
101256864
sly-u.5
for
HDA3
bra-r.6
for
103873731
bra-r.6
for
103837453
vvi-u.5
for
100244903
ppo-u.5
for
7456903
ppo-u.5
for
7453794
mtr-u.5
for
11414050
ghi-r.1
for
107949697
ghi-r.1
for
107886255
bna-r.1
for
106347870
bna-r.1
for
106362718
bna-r.1
for
106411141
sot-r.1
for
102605718
sot-r.1
for
102587267
cit-r.1
for
102617679
nta-r.1
for
107828384
nta-r.1
for
107830951


Ortholog ID: 6361
Species tae tae tae hvu bdi osa zma sbi ath gma gma gma sly sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot sot cit nta nta
Symbol LOC123144362 LOC123136940 LOC543173 LOC123402944 LOC100834631 LOC4345332 HDA108 LOC8073075 HDA6 HDA3 HDA7 HDA16 LOC101256864 HDA3 LOC103873731 LOC103837453 LOC100244903 LOC7456903 LOC7453794 LOC11414050 LOC107949697 LOC107886255 LOC106347870 LOC106362718 LOC106422589 LOC102605718 LOC102587267 LOC102617679 LOC107828384 LOC107830951
Function* histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 108 histone deacetylase 6 histone deacetylase 6 histone deacetylase histone deacetylase histone deacetylase histone deacetylase 6-like histone deacetylase histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6-like histone deacetylase 6 histone deacetylase 6 histone deacetylase 6-like histone deacetylase 6 histone deacetylase 6-like histone deacetylase 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 6
tae03083 Polycomb repressive complex 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 6
tae03083 Polycomb repressive complex 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 6
tae03083 Polycomb repressive complex 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 3
sbi03083 Polycomb repressive complex 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 4
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 3
gma04075 Plant hormone signal transduction 2
gma00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 3
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 4
gma03018 RNA degradation 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra04141 Protein processing in endoplasmic reticulum 4
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 5
mtr03083 Polycomb repressive complex 2
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123144362 123136940 543173 123402944 100834631 4345332 541681 8073075 836431 100801159 100807923 100819221 101256864 101258377 103873731 103837453 100244903 7456903 7453794 11414050 107949697 107886255 106347870 106362718 106422589 102605718 102587267 102617679 107828384 107830951
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