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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   104583732   putative pentatricopeptide repeat-containing protein At3g05240 
 osa-u.5   4346006   putative pentatricopeptide repeat-containing protein At3g05240 
 vvi-u.5   100854913   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 vvi-u.5   100853908   pentatricopeptide repeat-containing protein At3g12770 
 vvi-u.5   100263173   putative pentatricopeptide repeat-containing protein At3g05240 
 mtr-u.5   11405487   putative pentatricopeptide repeat-containing protein At3g05240 

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Top 50 coexpressed genes to 104583732 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 104583732 (bdi-r.1 coexpression data)

CoexMap"123152008"


taeLOC123152008 | Entrez gene ID : 123152008    
Species bdi osa vvi mtr gma bra sot zma ghi sbi sly cit ppo nta ath cre tae bna hvu
Paralog 1 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044427553.1 [sequence] [blastp]
XP_044427554.1 [sequence] [blastp]
XP_044427555.1 [sequence] [blastp]
XP_044427556.1 [sequence] [blastp]
XP_044427557.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_044427553.1)
chlo 6,  mito 4  (predict for XP_044427554.1)
chlo 6,  mito 4  (predict for XP_044427555.1)
chlo 6,  mito 4  (predict for XP_044427556.1)
chlo 6,  mito 4  (predict for XP_044427557.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_044427553.1)
mito 8  (predict for XP_044427554.1)
mito 8  (predict for XP_044427555.1)
mito 8  (predict for XP_044427556.1)
mito 8  (predict for XP_044427557.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
104583732
osa-u.5
for
4346006
vvi-u.5
for
100854913
vvi-u.5
for
100853908
vvi-u.5
for
100263173
mtr-u.5
for
11405487


Ortholog ID: 14016
Species bdi osa vvi vvi vvi mtr
Symbol LOC104583732 LOC4346006 LOC100854913 LOC100853908 LOC100263173 LOC11405487
Function* putative pentatricopeptide repeat-containing protein At3g05240 putative pentatricopeptide repeat-containing protein At3g05240 pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At3g12770 putative pentatricopeptide repeat-containing protein At3g05240 putative pentatricopeptide repeat-containing protein At3g05240
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104583732 4346006 100854913 100853908 100263173 11405487
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