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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123156985   polycomb group protein FIE1 
 hvu-r.1   123409904   polycomb group protein FIE1 
 bdi-r.1   100828611   polycomb group protein FIE2 
 osa-u.5   4344620   polycomb group protein FIE1-like 
 zma-u.5   542076   fertilization independent endosperm 2 
 zma-u.5   542075   fertilization independent endosperm 1 
 sbi-r.1   8067799   polycomb group protein FIE2 
 ath-u.5   FIE   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100127417   FIE 
 gma-u.5   100795288   polycomb group protein FIE1 
 sly-u.5   FIE   fertilization-independent endosperm protein 
 bra-r.6   103835815   polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM 
 vvi-u.5   100246903   polycomb group protein FIE1 
 ppo-u.5   18095896   polycomb group protein FIE1 
 mtr-u.5   25482354   polycomb group protein FIE1 
 ghi-r.1   107920781   polycomb group protein FIE1 
 ghi-r.1   107895196   polycomb group protein FIE1 
 bna-r.1   106453896   polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like 
 sot-r.1   102577673   fertilization-independent endosperm protein 
 cit-r.1   102631462   polycomb group protein FIE1 
 nta-r.1   107794471   polycomb group protein FIE1 
 nta-r.1   107766652   polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like 
 cre-r.1   CHLRE_16g693750v5   uncharacterized protein 

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Top 50 coexpressed genes to 123156985 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123156985 (tae-r.2 coexpression data)

CoexMap"123156985"


taeLOC123156985 | Entrez gene ID : 123156985    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 1 2 1 1 2 1 1 1 1 1 2 1 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03083 [list] [network] Polycomb repressive complex (239 genes)
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044431131.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_044431131.1)
Subcellular
localization
TargetP
other 3,  mito 3  (predict for XP_044431131.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123156985
hvu-r.1
for
123409904
bdi-r.1
for
100828611
osa-u.5
for
4344620
zma-u.5
for
542076
zma-u.5
for
542075
sbi-r.1
for
8067799
ath-u.5
for
FIE
gma-u.5
for
100127417
gma-u.5
for
100795288
sly-u.5
for
FIE
bra-r.6
for
103835815
vvi-u.5
for
100246903
ppo-u.5
for
18095896
mtr-u.5
for
25482354
ghi-r.1
for
107920781
ghi-r.1
for
107895196
bna-r.1
for
106453896
sot-r.1
for
102577673
cit-r.1
for
102631462
nta-r.1
for
107794471
nta-r.1
for
107766652
cre-r.1
for
CHLRE_16g693750v5


Ortholog ID: 4082
Species tae hvu bdi bdi osa zma zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123167651 LOC123409904 LOC100828611 LOC100838165 LOC4344620 LOC542076 LOC542075 LOC8067799 FIE LOC100127417 LOC100795288 FIE LOC103869280 LOC100246903 LOC18095896 LOC25482354 LOC107920781 LOC107895196 LOC106453896 LOC106365963 LOC102577673 LOC102631462 LOC107794471 LOC107766652 CHLRE_16g693750v5
Function* polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE2 polycomb group protein FIE2 polycomb group protein FIE1-like fertilization independent endosperm 2 fertilization independent endosperm 1 polycomb group protein FIE2 Transducin/WD40 repeat-like superfamily protein FIE polycomb group protein FIE1 fertilization-independent endosperm protein polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like fertilization-independent endosperm protein polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03018 RNA degradation 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma03013 Nucleocytoplasmic transport 2
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03013 Nucleocytoplasmic transport 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03013 Nucleocytoplasmic transport 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123167651 123409904 100828611 100838165 4344620 542076 542075 8067799 821622 100127417 100795288 100136877 103869280 100246903 18095896 25482354 107920781 107895196 106453896 106365963 102577673 102631462 107794471 107766652 66056835
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