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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123157929   pentatricopeptide repeat-containing protein At5g39710 
 osa-u.5   4340159   pentatricopeptide repeat-containing protein At5g39710 
 zma-u.5   103638071   pentatricopeptide repeat-containing protein At5g39710 
 zma-u.5   100193275   pentatricopeptide repeat-containing protein At5g39710 
 ath-u.5   EMB2745   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100808787   pentatricopeptide repeat-containing protein At5g39710 
 sly-u.5   101261764   pentatricopeptide repeat-containing protein At5g39710 
 vvi-u.5   100855388   pentatricopeptide repeat-containing protein At5g39710 
 ppo-u.5   7490013   pentatricopeptide repeat-containing protein At5g39710 
 mtr-u.5   25482653   pentatricopeptide repeat-containing protein At5g39710 

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Top 50 coexpressed genes to 123157929 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123157929 (tae-r.2 coexpression data)

CoexMap"123157929"


taeLOC123157929 | Entrez gene ID : 123157929    
Species tae osa zma ath gma sly vvi ppo mtr hvu cit bra ghi sbi bdi nta bna cre sot
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044432046.1 [sequence] [blastp]
XP_044432047.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for XP_044432046.1)
chlo 9,  cyto 1,  mito 1  (predict for XP_044432047.1)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for XP_044432046.1)
chlo 5,  mito 3  (predict for XP_044432047.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123157929
osa-u.5
for
4340159
zma-u.5
for
103638071
zma-u.5
for
100193275
ath-u.5
for
EMB2745
gma-u.5
for
100808787
sly-u.5
for
101261764
vvi-u.5
for
100855388
ppo-u.5
for
7490013
mtr-u.5
for
25482653


Ortholog ID: 10972
Species tae tae hvu bdi osa zma zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123167312 LOC123150940 LOC123408152 LOC100838857 LOC4340159 LOC103638071 LOC100193275 LOC8069162 EMB2745 LOC100808787 LOC101261764 LOC103863910 LOC100855388 LOC7490013 LOC25482653 LOC107927961 LOC107944404 LOC106432336 LOC106446037 LOC102602481 LOC102609301 LOC107813565 LOC107788753
Function* pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710-like pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g39710
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123167312 123150940 123408152 100838857 4340159 103638071 100193275 8069162 833967 100808787 101261764 103863910 100855388 7490013 25482653 107927961 107944404 106432336 106446037 102602481 102609301 107813565 107788753
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