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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123157974   peptidyl-prolyl cis-trans isomerase, chloroplastic 
 osa-u.5   4345443   peptidyl-prolyl cis-trans isomerase, chloroplastic 
 zma-u.5   100285487   peptidyl-prolyl cis-trans isomerase 
 ath-u.5   CYP38   cyclophilin 38 
 gma-u.5   CYP53   peptidyl-prolyl cis-trans isomerase CYP53 
 gma-u.5   CYP60   peptidyl-prolyl cis-trans isomerase CYP60 
 sly-u.5   101249229   peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic 
 vvi-u.5   100262894   peptidyl-prolyl cis-trans isomerase, chloroplastic 
 ppo-u.5   18107279   peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic 
 ppo-u.5   18095299   peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic 
 mtr-u.5   25495180   peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic 

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Top 50 coexpressed genes to 123157974 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123157974 (tae-r.2 coexpression data)

CoexMap"123157974"


taeLOC123157974 | Entrez gene ID : 123157974    
Species tae osa zma ath gma sly vvi ppo mtr hvu cit bra ghi sbi bdi nta bna cre sot
Paralog 1 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (93 genes)  IEA  
GO CC
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (173 genes)  IEA  
Protein XP_044432070.1 [sequence] [blastp]
XP_044432071.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4  (predict for XP_044432070.1)
chlo 6,  mito 4  (predict for XP_044432071.1)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_044432070.1)
mito 7,  chlo 3  (predict for XP_044432071.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123157974
osa-u.5
for
4345443
zma-u.5
for
100285487
ath-u.5
for
CYP38
gma-u.5
for
CYP53
gma-u.5
for
CYP60
sly-u.5
for
101249229
vvi-u.5
for
100262894
ppo-u.5
for
18107279
ppo-u.5
for
18095299
mtr-u.5
for
25495180


Ortholog ID: 8465
Species tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123154477 LOC123165340 LOC123407914 LOC100824311 LOC4345443 LOC100285487 LOC8070008 CYP38 CYP53 CYP60 LOC101249229 LOC103870984 LOC100262894 LOC18107279 LOC18095299 LOC25495180 LOC107888646 LOC107958574 LOC125587607 LOC125609196 LOC102588177 LOC102624093 LOC107786804 LOC107827288 CHLRE_03g189800v5
Function* peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase peptidyl-prolyl cis-trans isomerase, chloroplastic cyclophilin 38 peptidyl-prolyl cis-trans isomerase CYP53 peptidyl-prolyl cis-trans isomerase CYP60 peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic-like peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic-like peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 4
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 6
gma00860 Porphyrin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly00860 Porphyrin metabolism 3
sly01240 Biosynthesis of cofactors 3
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 3
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 4
sot00860 Porphyrin metabolism 3
sot00195 Photosynthesis 2
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 3
nta00500 Starch and sucrose metabolism 3
nta00999 Biosynthesis of various plant secondary metabolites 3
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123154477 123165340 123407914 100824311 4345443 100285487 8070008 821137 100819150 100809682 101249229 103870984 100262894 18107279 18095299 25495180 107888646 107958574 125587607 125609196 102588177 102624093 107786804 107827288 5717510
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