ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123163899	laccase-25
tae-r.2	123078841	laccase-25
hvu-r.1	123405087	laccase-25-like
bdi-r.1	100843407	laccase-25
osa-u.5	4351911	laccase-25-like
osa-u.5	9272497	laccase-14
osa-u.5	4351915	laccase-24-like
zma-u.5	103640860	laccase-25-like
zma-u.5	103631856	laccase-14
sbi-r.1	8086173	laccase-25
sbi-r.1	8058914	laccase-6
ath-u.5	LAC7	laccase 7
ath-u.5	AT5G01050	Laccase/Diphenol oxidase family protein
ath-u.5	LAC8	laccase 8
gma-u.5	100815453	laccase-7
sly-u.5	100147721	laccase
bra-r.6	103870556	laccase-7
ppo-u.5	7454973	laccase-7
mtr-u.5	25498651	laccase-7
mtr-u.5	25491506	laccase-7
mtr-u.5	25498652	laccase-7
ghi-r.1	107919485	laccase-7
ghi-r.1	107899017	laccase-7
ghi-r.1	107899016	laccase-7
bna-r.1	125587928	laccase-7-like
bna-r.1	111215792	laccase-7
sot-r.1	102582004	laccase-7-like
cit-r.1	102608728	laccase-7-like
cit-r.1	102628641	laccase-7-like
cit-r.1	102627565	laccase-7-like
nta-r.1	107785622	laccase-7-like
nta-r.1	107792673	laccase-7-like
nta-r.1	107801890	laccase-7-like

Annotation

functional annotation

KEGG

GO BP

GO:0046274 [list] [network] lignin catabolic process

(85 genes)

IEA

GO CC

GO:0048046 [list] [network] apoplast

(253 genes)

IEA

GO MF

GO:0052716 [list] [network] hydroquinone:oxygen oxidoreductase activity	(85 genes)	IEA
GO:0005507 [list] [network] copper ion binding	(212 genes)	IEA

Protein

XP_044437245.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, chlo 3, extr 1, nucl 1, mito 1, golg 1

(predict for XP_044437245.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_044437245.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123163899	tae-r.2 for 123078841	hvu-r.1 for 123405087	bdi-r.1 for 100843407	osa-u.5 for 4351911	osa-u.5 for 9272497	osa-u.5 for 4351915	zma-u.5 for 103640860	zma-u.5 for 103631856	sbi-r.1 for 8086173	sbi-r.1 for 8058914	ath-u.5 for LAC7	ath-u.5 for AT5G01050	ath-u.5 for LAC8	gma-u.5 for 100815453	sly-u.5 for 100147721	bra-r.6 for 103870556	ppo-u.5 for 7454973	mtr-u.5 for 25498651	mtr-u.5 for 25491506	mtr-u.5 for 25498652	ghi-r.1 for 107919485	ghi-r.1 for 107899017	ghi-r.1 for 107899016	bna-r.1 for 125587928	bna-r.1 for 111215792	sot-r.1 for 102582004	cit-r.1 for 102608728	cit-r.1 for 102628641	cit-r.1 for 102627565	nta-r.1 for 107785622	nta-r.1 for 107792673	nta-r.1 for 107801890

Ortholog

Ortholog ID: 2027

Species

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

mtr

ghi

bna

sot

cit

nta

Symbol

LAC7

LAC8

Function^*

laccase-25-like

laccase-25

laccase-25-like

laccase-24-like

laccase-6

laccase-25-like

laccase-6-like

laccase-25

laccase-6

laccase 7

Laccase/Diphenol oxidase family protein

laccase 8

laccase-7

laccase

laccase-7

laccase-7-like

laccase-7

laccase-7-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	3
bdi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa02010	ABC transporters	2
osa00350	Tyrosine metabolism	2
osa00360	Phenylalanine metabolism	2
osa00380	Tryptophan metabolism	2
osa00901	Indole alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	3
osa04016	MAPK signaling pathway - plant	2
osa04626	Plant-pathogen interaction	2
osa00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	6
zma00270	Cysteine and methionine metabolism	2
zma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00941	Flavonoid biosynthesis	4
sbi00350	Tyrosine metabolism	2
sbi00950	Isoquinoline alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00053	Ascorbate and aldarate metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00480	Glutathione metabolism	2
gma00350	Tyrosine metabolism	2
gma00950	Isoquinoline alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00565	Ether lipid metabolism	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00073	Cutin, suberine and wax biosynthesis	3
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00561	Glycerolipid metabolism	3
bra00564	Glycerophospholipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	6
mtr00941	Flavonoid biosynthesis	3
mtr04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00943	Isoflavonoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna02010	ABC transporters	2
bna04981	Folate transport and metabolism	2
bna04016	MAPK signaling pathway - plant	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	3
cit00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	3
cit00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

Expression

Expression pattern

Entrez Gene ID^*

123405087

100843407

4351911

4351915

107276446

103640860

103651008

8086173

8058914

820078

831812

831877

100812336

100814392

100814926

100147721

103870556

25498651

25491506

25498652

107898120

107948847

107948848

125587928

111215792

102582004

102608728

102628641

102627565

107785622

107792673

107801890

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123163899 (tae-r.2 coexpression data)

Top 50 enrichment test to 123163899 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	ppo	mtr	ghi	bna	sot	cit	nta	vvi	cre
Paralog	2	1	1	3	2	2	3	1	1	1	1	3	3	2	1	3	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123163899 (tae-r.2 coexpression data)

Top 50 enrichment test to 123163899 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**