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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123164334   transcription initiation factor TFIID subunit 1 
 tae-r.2   123149524   transcription initiation factor TFIID subunit 1 
 tae-r.2   123160309   transcription initiation factor TFIID subunit 1 
 tae-r.2   123160311   transcription initiation factor TFIID subunit 1 
 hvu-r.1   123413429   transcription initiation factor TFIID subunit 1-like 
 hvu-r.1   123413427   transcription initiation factor TFIID subunit 1-like 
 bdi-r.1   100835170   transcription initiation factor TFIID subunit 1 
 osa-u.5   9266475   transcription initiation factor TFIID subunit 1-like 
 zma-u.5   103638720   transcription initiation factor TFIID subunit 1 
 sbi-r.1   8069327   transcription initiation factor TFIID subunit 1 
 ath-u.5   HAF01   HAC13 protein (HAC13) 
 gma-u.5   100783866   transcription initiation factor TFIID subunit 1 
 gma-u.5   100780733   transcription initiation factor TFIID subunit 1 
 sly-u.5   101245072   transcription initiation factor TFIID subunit 1 
 bra-r.6   103837543   transcription initiation factor TFIID subunit 1 
 bra-r.6   103833661   transcription initiation factor TFIID subunit 1 
 vvi-u.5   100254115   transcription initiation factor TFIID subunit 1 
 ppo-u.5   7486075   transcription initiation factor TFIID subunit 1 
 ppo-u.5   7472543   transcription initiation factor TFIID subunit 1 
 mtr-u.5   11409951   transcription initiation factor TFIID subunit 1 
 ghi-r.1   107914621   transcription initiation factor TFIID subunit 1 
 ghi-r.1   107896800   transcription initiation factor TFIID subunit 1 
 bna-r.1   125577165   transcription initiation factor TFIID subunit 1-like 
 bna-r.1   106433033   transcription initiation factor TFIID subunit 1 
 bna-r.1   106421599   transcription initiation factor TFIID subunit 1-like 
 sot-r.1   102580278   transcription initiation factor TFIID subunit 1 
 cit-r.1   102622749   transcription initiation factor TFIID subunit 1 
 nta-r.1   107813931   transcription initiation factor TFIID subunit 1 
 nta-r.1   107804451   transcription initiation factor TFIID subunit 1 
 cre-r.1   CHLRE_03g175851v5   uncharacterized protein 
 cre-r.1   CHLRE_10g425501v5   uncharacterized protein 

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Top 50 coexpressed genes to 123164334 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123164334 (tae-r.2 coexpression data)

CoexMap"123164334"


taeLOC123164334 | Entrez gene ID : 123164334    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 1 1 1 1 1 2 1 2 1 2 1 2 3 1 1 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03022 [list] [network] Basal transcription factors (188 genes)
GO BP
GO:0051123 [list] [network] RNA polymerase II preinitiation complex assembly  (45 genes)  IEA  
GO:0006366 [list] [network] transcription by RNA polymerase II  (294 genes)  IEA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (71 genes)  IEA  
GO MF
GO:0004402 [list] [network] histone acetyltransferase activity  (42 genes)  IEA  
GO:0017025 [list] [network] TBP-class protein binding  (52 genes)  IEA  
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (68 genes)  IEA  
Protein XP_044437693.1 [sequence] [blastp]
XP_044437694.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for XP_044437693.1)
nucl 9,  cyto 1,  vacu 1  (predict for XP_044437694.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044437693.1)
other 9  (predict for XP_044437694.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123164334
tae-r.2
for
123149524
tae-r.2
for
123160309
tae-r.2
for
123160311
hvu-r.1
for
123413429
hvu-r.1
for
123413427
bdi-r.1
for
100835170
osa-u.5
for
9266475
zma-u.5
for
103638720
sbi-r.1
for
8069327
ath-u.5
for
HAF01
gma-u.5
for
100783866
gma-u.5
for
100780733
sly-u.5
for
101245072
bra-r.6
for
103837543
bra-r.6
for
103833661
vvi-u.5
for
100254115
ppo-u.5
for
7486075
ppo-u.5
for
7472543
mtr-u.5
for
11409951
ghi-r.1
for
107914621
ghi-r.1
for
107896800
bna-r.1
for
125577165
bna-r.1
for
106433033
bna-r.1
for
106421599
sot-r.1
for
102580278
cit-r.1
for
102622749
nta-r.1
for
107813931
nta-r.1
for
107804451
cre-r.1
for
CHLRE_03g175851v5
cre-r.1
for
CHLRE_10g425501v5


Ortholog ID: 6003
Species tae tae tae hvu hvu bdi osa zma sbi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta cre cre
Symbol LOC123164334 LOC123149524 LOC123164333 LOC123413429 LOC123413427 LOC100835170 LOC9266475 LOC103638720 LOC8069327 HAF01 LOC100783866 LOC100780733 LOC101245072 LOC103837543 LOC103833661 LOC100254115 LOC7486075 LOC7472543 LOC11409951 LOC107914621 LOC107896800 LOC125577165 LOC106433033 LOC106421599 LOC102580278 LOC102622749 LOC107813931 LOC107804451 CHLRE_03g175851v5 CHLRE_10g425501v5
Function* transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1-like transcription initiation factor TFIID subunit 1-like transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1-like transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 HAC13 protein (HAC13) transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1-like transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1-like transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 transcription initiation factor TFIID subunit 1 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 5
tae03082 ATP-dependent chromatin remodeling 3
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 4
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 5
tae03082 ATP-dependent chromatin remodeling 3
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03040 Spliceosome 2
gma03015 mRNA surveillance pathway 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03022 Basal transcription factors 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04145 Phagosome 2
ghi00310 Lysine degradation 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
ghi03083 Polycomb repressive complex 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03022 Basal transcription factors 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta03022 Basal transcription factors 2
nta04120 Ubiquitin mediated proteolysis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta03022 Basal transcription factors 2
nta04120 Ubiquitin mediated proteolysis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04130 SNARE interactions in vesicular transport 2
cre03250 Viral life cycle - HIV-1 2
cre03272 Virion - Hepatitis viruses 2
cre04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123164334 123149524 123164333 123413429 123413427 100835170 9266475 103638720 8069327 840169 100783866 100780733 101245072 103837543 103833661 100254115 7486075 7472543 11409951 107914621 107896800 125577165 106433033 106421599 102580278 102622749 107813931 107804451 5728857 5728193
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