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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123165398   lysine-specific demethylase 5B 
 tae-r.2   123161019   lysine-specific demethylase 5B 
 tae-r.2   123149931   lysine-specific demethylase 5B 
 hvu-r.1   123413025   uncharacterized LOC123413025 
 bdi-r.1   100829070   lysine-specific demethylase 5C 
 osa-u.5   9271593   lysine-specific demethylase JMJ17 
 zma-u.5   103626493   lysine-specific demethylase 5B 
 sbi-r.1   8066399   lysine-specific demethylase 5D 
 ath-u.5   AT1G63490   transcription factor jumonji (jmjC) domain-containing protein 
 gma-u.5   100819576   lysine-specific demethylase rbr-2 
 gma-u.5   100789512   lysine-specific demethylase 5A 
 sly-u.5   101259658   lysine-specific demethylase JMJ17 
 bra-r.6   103838273   lysine-specific demethylase 5B 
 vvi-u.5   100261599   lysine-specific demethylase JMJ17 
 ppo-u.5   18097038   lysine-specific demethylase JMJ17 
 mtr-u.5   11429104   lysine-specific demethylase 5B 
 ghi-r.1   107936696   lysine-specific demethylase 5D 
 ghi-r.1   107962976   lysine-specific demethylase 5D 
 bna-r.1   106450823   lysine-specific demethylase 5B 
 bna-r.1   106390274   lysine-specific demethylase 5B 
 sot-r.1   102601233   lysine-specific demethylase 5B 
 cit-r.1   102617380   lysine-specific demethylase JMJ17 
 nta-r.1   107763178   lysine-specific demethylase JMJ17-like 
 nta-r.1   107784173   lysine-specific demethylase JMJ17 
 cre-r.1   CHLRE_12g514250v5   uncharacterized protein 

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Top 50 coexpressed genes to 123165398 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123165398 (tae-r.2 coexpression data)

CoexMap"123165398"


taeLOC123165398 | Entrez gene ID : 123165398    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (437 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (6310 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (928 genes)  IEA  
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0032452 [list] [network] histone demethylase activity  (40 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
Protein XP_044438968.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 1,  cyto 1,  cysk 1  (predict for XP_044438968.1)
Subcellular
localization
TargetP
other 3,  chlo 3  (predict for XP_044438968.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123165398
tae-r.2
for
123161019
tae-r.2
for
123149931
hvu-r.1
for
123413025
bdi-r.1
for
100829070
osa-u.5
for
9271593
zma-u.5
for
103626493
sbi-r.1
for
8066399
ath-u.5
for
AT1G63490
gma-u.5
for
100819576
gma-u.5
for
100789512
sly-u.5
for
101259658
bra-r.6
for
103838273
vvi-u.5
for
100261599
ppo-u.5
for
18097038
mtr-u.5
for
11429104
ghi-r.1
for
107936696
ghi-r.1
for
107962976
bna-r.1
for
106450823
bna-r.1
for
106390274
sot-r.1
for
102601233
cit-r.1
for
102617380
nta-r.1
for
107763178
nta-r.1
for
107784173
cre-r.1
for
CHLRE_12g514250v5


Ortholog ID: 9273
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123165398 LOC123161019 LOC123149931 LOC123413025 LOC100829070 LOC9271593 LOC103626493 LOC8066399 AT1G63490 LOC100819576 LOC100789512 LOC101259658 LOC103838273 LOC100261599 LOC18097038 LOC11429104 LOC107936696 LOC107962976 LOC106450823 LOC106390274 LOC102601233 LOC102617380 LOC107763178 LOC107784173 CHLRE_12g514250v5
Function* lysine-specific demethylase 5B lysine-specific demethylase 5B lysine-specific demethylase 5B uncharacterized LOC123413025 lysine-specific demethylase 5C lysine-specific demethylase JMJ17 lysine-specific demethylase 5B lysine-specific demethylase 5D transcription factor jumonji (jmjC) domain-containing protein lysine-specific demethylase rbr-2 lysine-specific demethylase 5A lysine-specific demethylase JMJ17 lysine-specific demethylase 5B lysine-specific demethylase JMJ17 lysine-specific demethylase JMJ17 lysine-specific demethylase 5B lysine-specific demethylase 5D lysine-specific demethylase 5D lysine-specific demethylase 5B lysine-specific demethylase 5B lysine-specific demethylase 5B lysine-specific demethylase JMJ17 lysine-specific demethylase JMJ17-like lysine-specific demethylase JMJ17 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03013 Nucleocytoplasmic transport 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae03013 Nucleocytoplasmic transport 3
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu03083 Polycomb repressive complex 2
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
bdi03015 mRNA surveillance pathway 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03082 ATP-dependent chromatin remodeling 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra04136 Autophagy - other 2
bra04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03015 mRNA surveillance pathway 2
vvi03018 RNA degradation 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04145 Phagosome 2
ghi00310 Lysine degradation 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04145 Phagosome 2
ghi00310 Lysine degradation 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna00310 Lysine degradation 4
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 5
bna03083 Polycomb repressive complex 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123165398 123161019 123149931 123413025 100829070 9271593 103626493 8066399 842655 100819576 100789512 101259658 103838273 100261599 18097038 11429104 107936696 107962976 106450823 106390274 102601233 102617380 107763178 107784173 66055556
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