ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123169262	uncharacterized LOC123169262
tae-r.2	123121758	uncharacterized LOC123121758
tae-r.2	123046238	uncharacterized LOC123046238
tae-r.2	123147847	uncharacterized LOC123147847
hvu-r.1	123413284	uncharacterized LOC123413284
hvu-r.1	123431437	uncharacterized LOC123431437
bdi-r.1	100838368	uncharacterized LOC100838368
bdi-r.1	100833593	uncharacterized LOC100833593
osa-u.5	4340534	uncharacterized LOC4340534
osa-u.5	4348928	uncharacterized LOC4348928
zma-u.5	103629928	uncharacterized LOC103629928
zma-u.5	100501598	uncharacterized LOC100501598
sbi-r.1	8081279	uncharacterized LOC8081279
sbi-r.1	8067136	uncharacterized LOC8067136
gma-u.5	100820242	uncharacterized LOC100820242
gma-u.5	100813775	uncharacterized LOC100813775
gma-u.5	100810111	uncharacterized LOC100810111
sly-u.5	101263206	uncharacterized LOC101263206
sly-u.5	101246461	uncharacterized LOC101246461
bra-r.6	103838797	uncharacterized LOC103838797
bra-r.6	103845912	uncharacterized LOC103845912
vvi-u.5	100257505	uncharacterized LOC100257505
vvi-u.5	100263256	uncharacterized LOC100263256
ppo-u.5	7471470	uncharacterized LOC7471470
ppo-u.5	7462626	uncharacterized LOC7462626
ppo-u.5	7495128	uncharacterized LOC7495128
mtr-u.5	25489394	uncharacterized LOC25489394
mtr-u.5	25482726	uncharacterized LOC25482726
ghi-r.1	107905035	uncharacterized LOC107905035
ghi-r.1	107909978	uncharacterized LOC107909978
sot-r.1	102592359	uncharacterized LOC102592359
sot-r.1	102602270	uncharacterized LOC102602270
cit-r.1	102625889	uncharacterized LOC102625889
cit-r.1	102621750	uncharacterized LOC102621750
nta-r.1	107764497	uncharacterized LOC107764497
nta-r.1	107784058	uncharacterized LOC107784058
nta-r.1	107813271	uncharacterized LOC107813271
cre-r.1	CHLRE_06g278183v5	uncharacterized protein

Top 50 coexpressed genes to 123169262 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123169262 (tae-r.2 coexpression data)

CoexMap"123169262"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0035556 [list] [network] intracellular signal transduction

(911 genes)

IEA

GO CC

GO MF

Protein

XP_044443028.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 2, vacu 1, pero 1

(predict for XP_044443028.1)

Subcellular
localization
TargetP

other 9

(predict for XP_044443028.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123169262	tae-r.2 for 123121758	tae-r.2 for 123046238	tae-r.2 for 123147847	hvu-r.1 for 123413284	hvu-r.1 for 123431437	bdi-r.1 for 100838368	bdi-r.1 for 100833593	osa-u.5 for 4340534	osa-u.5 for 4348928	zma-u.5 for 103629928	zma-u.5 for 100501598	sbi-r.1 for 8081279	sbi-r.1 for 8067136	gma-u.5 for 100820242	gma-u.5 for 100813775	gma-u.5 for 100810111	sly-u.5 for 101263206	sly-u.5 for 101246461	bra-r.6 for 103838797	bra-r.6 for 103845912	vvi-u.5 for 100257505	vvi-u.5 for 100263256	ppo-u.5 for 7471470	ppo-u.5 for 7462626	ppo-u.5 for 7495128	mtr-u.5 for 25489394	mtr-u.5 for 25482726	ghi-r.1 for 107905035	ghi-r.1 for 107909978	sot-r.1 for 102592359	sot-r.1 for 102602270	cit-r.1 for 102625889	cit-r.1 for 102621750	nta-r.1 for 107764497	nta-r.1 for 107784058	nta-r.1 for 107813271	cre-r.1 for CHLRE_06g278183v5

Ortholog

Ortholog ID: 2551

Species

tae

hvu

bdi

osa

zma

sbi

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC123147847

uncharacterized LOC123162645

uncharacterized LOC123181104

uncharacterized LOC123413284

uncharacterized LOC123431437

uncharacterized LOC100838368

uncharacterized LOC100833593

uncharacterized LOC4340534

uncharacterized LOC4348928

uncharacterized LOC103629928

uncharacterized LOC100501598

uncharacterized LOC8081279

uncharacterized LOC8067136

uncharacterized LOC100820242

uncharacterized LOC100794983

uncharacterized LOC100784667

uncharacterized LOC101263206

uncharacterized LOC101246461

uncharacterized LOC103838797

uncharacterized LOC103845912

uncharacterized LOC100257505

uncharacterized LOC100263256

uncharacterized LOC7471470

uncharacterized LOC7462626

uncharacterized LOC7495128

uncharacterized LOC25482726

uncharacterized LOC25500994

uncharacterized LOC107905035

uncharacterized LOC107886352

uncharacterized LOC106422083

uncharacterized LOC106430505

uncharacterized LOC102592359

uncharacterized LOC102602270

uncharacterized LOC102625889

uncharacterized LOC102621750

uncharacterized LOC107764497

uncharacterized LOC107784058

uncharacterized LOC107813271

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	7
tae03060	Protein export	3
tae04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	2
tae01232	Nucleotide metabolism	2
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3
tae04626	Plant-pathogen interaction	3
tae03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	8
hvu04145	Phagosome	4
hvu04144	Endocytosis	2
hvu04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	3
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	5
zma00970	Aminoacyl-tRNA biosynthesis	2
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03030	DNA replication	2
sbi03410	Base excision repair	2
sbi03420	Nucleotide excision repair	2
sbi03430	Mismatch repair	2
sbi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	2
gma00640	Propanoate metabolism	2
gma00785	Lipoic acid metabolism	2
gma01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	2
gma00650	Butanoate metabolism	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3
sly00860	Porphyrin metabolism	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00062	Fatty acid elongation	2
bra01040	Biosynthesis of unsaturated fatty acids	2
bra01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	3
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00510	N-Glycan biosynthesis	4
ppo00513	Various types of N-glycan biosynthesis	4
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	3
cit03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2
nta03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03420	Nucleotide excision repair	5
nta03022	Basal transcription factors	3
nta03008	Ribosome biogenesis in eukaryotes	2
nta03013	Nucleocytoplasmic transport	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
nta00940	Phenylpropanoid biosynthesis	3
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

123147847

123162645

123181104

123413284

123431437

100838368

100833593

4340534

4348928

103629928

100501598

8081279

8067136

100820242

100794983

100784667

101263206

101246461

103838797

103845912

100257505

100263256

7471470

7462626

7495128

25482726

25500994

107905035

107886352

106422083

106430505

102592359

102602270

102625889

102621750

107764497

107784058

107813271

5723641

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	gma	sly	bra	vvi	ppo	mtr	ghi	sot	cit	nta	cre	bna	ath
Paralog	4	2	2	2	2	2	3	2	2	2	3	2	2	2	2	3	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123169262 (tae-r.2 coexpression data)

Top 50 enrichment test to 123169262 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**