ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123181510	ADP-ribosylation factor
osa-u.5	107276116	ADP-ribosylation factor
osa-u.5	4328177	uncharacterized LOC4328177
osa-u.5	4330422	uncharacterized LOC4330422
zma-u.5	100381426	uncharacterized LOC100381426
zma-u.5	100192068	uncharacterized LOC100192068
ath-u.5	ARFB1C	ADP-ribosylation factor B1C
ath-u.5	ARFB1B	ADP-ribosylation factor B1B
gma-u.5	100816276	ADP-ribosylation factor-like
gma-u.5	100791271	ADP-ribosylation factor-like protein
gma-u.5	100499903	uncharacterized LOC100499903
sly-u.5	101264106	uncharacterized LOC101264106
sly-u.5	101261925	uncharacterized LOC101261925
vvi-u.5	100254624	ADP-ribosylation factor-like
ppo-u.5	112325621	uncharacterized LOC112325621
ppo-u.5	7494400	uncharacterized LOC7494400
mtr-u.5	11423544	ADP-ribosylation factor
mtr-u.5	11437745	ADP-ribosylation factor
mtr-u.5	11440933	ADP-ribosylation factor

Top 50 coexpressed genes to 123181510 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123181510 (tae-r.2 coexpression data)

CoexMap"123181510"

[Cytoscape]

Annotation

functional annotation

KEGG

taes04144 [list] [network] Endocytosis (447 genes)

GO BP

GO CC

GO MF

GO:0003924 [list] [network] GTPase activity	(553 genes)	IEA
GO:0005525 [list] [network] GTP binding	(638 genes)	IEA

Protein

XP_044449721.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, chlo 4, nucl 1, golg 1

(predict for XP_044449721.1)

Subcellular
localization
TargetP

other 7, scret 3

(predict for XP_044449721.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123181510	osa-u.5 for 107276116	osa-u.5 for 4328177	osa-u.5 for 4330422	zma-u.5 for 100381426	zma-u.5 for 100192068	ath-u.5 for ARFB1C	ath-u.5 for ARFB1B	gma-u.5 for 100816276	gma-u.5 for 100791271	gma-u.5 for 100499903	sly-u.5 for 101264106	sly-u.5 for 101261925	vvi-u.5 for 100254624	ppo-u.5 for 112325621	ppo-u.5 for 7494400	mtr-u.5 for 11423544	mtr-u.5 for 11437745	mtr-u.5 for 11440933

Ortholog

Ortholog ID: 2553

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

ARFB1B

ARFB1C

Function^*

ADP-ribosylation factor

ADP-ribosylation factor-like

ADP-ribosylation factor

uncharacterized LOC100192068

ADP-ribosylation factor

ADP-ribosylation factor 1

ADP-ribosylation factor B1B

ADP-ribosylation factor B1C

ADP-ribosylation factor-like

uncharacterized LOC100499903

uncharacterized LOC101261925

uncharacterized LOC101264106

ADP-ribosylation factor 1-like 2

ADP-ribosylation factor

ADP-ribosylation factor-like

uncharacterized LOC7494400

uncharacterized LOC112325621

ADP-ribosylation factor

ADP-ribosylation factor 1-like 2

uncharacterized LOC102609009

uncharacterized LOC107823941

uncharacterized LOC107778016

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	3
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00760	Nicotinate and nicotinamide metabolism	3
tae01240	Biosynthesis of cofactors	3
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	6
tae00020	Citrate cycle (TCA cycle)	3
tae00270	Cysteine and methionine metabolism	3
tae00566	Sulfoquinovose metabolism	3
tae00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi04016	MAPK signaling pathway - plant	2
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	6
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa04130	SNARE interactions in vesicular transport	2
osa04145	Phagosome	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	4
zma04145	Phagosome	3
zma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04130	SNARE interactions in vesicular transport	3
sbi00190	Oxidative phosphorylation	2
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	5
sbi03013	Nucleocytoplasmic transport	3
sbi03015	mRNA surveillance pathway	3
sbi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2
ath04136	Autophagy - other	2
ath04382	Cornified envelope formation	2
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	7
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	8
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04130	SNARE interactions in vesicular transport	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	4
ppo04144	Endocytosis	3
ppo00190	Oxidative phosphorylation	2
ppo04142	Lysosome	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	3
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	4
ghi04120	Ubiquitin mediated proteolysis	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03083	Polycomb repressive complex	2
ghi04120	Ubiquitin mediated proteolysis	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	4
bna00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	4
bna00270	Cysteine and methionine metabolism	3
bna00330	Arginine and proline metabolism	3
bna00480	Glutathione metabolism	3
bna00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3
sot03050	Proteasome	3
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03060	Protein export	3
sot04141	Protein processing in endoplasmic reticulum	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	3
cit04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	2
nta04142	Lysosome	2
nta03420	Nucleotide excision repair	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta03040	Spliceosome	2
nta03420	Nucleotide excision repair	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04120	Ubiquitin mediated proteolysis	4
cre03083	Polycomb repressive complex	2
cre04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

123128086

123136033

123404546

123437081

100836668

100826050

4349518

107276116

100192068

8086279

8055086

831569

821079

100816276

100499903

101261925

101264106

103855133

103846274

100254624

7494400

112325621

11440933

11423544

121204742

107963505

125587545

106435950

102582856

102604392

102609009

107823941

107778016

5716652

The preparation time of this page was 0.1 [sec].


Species	tae	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre
Paralog	1	3	2	2	3	2	1	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123181510 (tae-r.2 coexpression data)

Top 50 enrichment test to 123181510 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**