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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123183200   protein SUPPRESSOR OF PHYA-105 1 
 osa-u.5   4339663   protein SUPPRESSOR OF PHYA-105 1 
 zma-u.5   103635349   protein SUPPRESSOR OF PHYA-105 1 
 zma-u.5   100384276   Protein SUPPRESSOR OF PHYA-105 1 
 ath-u.5   SPA1   SPA (suppressor of phyA-105) protein family 
 ath-u.5   SPA2   SPA1-related 2 
 gma-u.5   100784300   protein SPA1-RELATED 2 
 gma-u.5   100778303   protein SPA1-RELATED 2 
 gma-u.5   100776980   protein SPA1-RELATED 2 
 sly-u.5   101249027   protein SUPPRESSOR OF PHYA-105 1-like 
 sly-u.5   101263834   protein SPA1-RELATED 2 
 vvi-u.5   100256812   protein SUPPRESSOR OF PHYA-105 1 
 vvi-u.5   100257085   protein SPA1-RELATED 2 
 ppo-u.5   7479329   protein SPA1-RELATED 2 
 ppo-u.5   18097053   protein SPA1-RELATED 2 
 ppo-u.5   7492759   protein SUPPRESSOR OF PHYA-105 1 
 mtr-u.5   25500742   protein SUPPRESSOR OF PHYA-105 1 
 mtr-u.5   11437198   protein SPA1-RELATED 2 

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Top 50 coexpressed genes to 123183200 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123183200 (tae-r.2 coexpression data)

CoexMap"123183200"


taeLOC123183200 | Entrez gene ID : 123183200    
Species tae osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot bna ghi
Paralog 1 1 2 2 3 2 2 3 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes04712 [list] [network] Circadian rhythm - plant (179 genes)
GO BP
GO:0009640 [list] [network] photomorphogenesis  (40 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044451896.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_044451896.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044451896.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123183200

.
osa-u.5
for
4339663

.
zma-u.5
for
103635349

.
zma-u.5
for
100384276

.
ath-u.5
for
SPA1

.
ath-u.5
for
SPA2

.
gma-u.5
for
100784300

.
gma-u.5
for
100778303

.
gma-u.5
for
100776980

.
sly-u.5
for
101249027

.
sly-u.5
for
101263834

.
vvi-u.5
for
100256812

.
vvi-u.5
for
100257085

.
ppo-u.5
for
7479329

.
ppo-u.5
for
18097053

.
ppo-u.5
for
7492759

.
mtr-u.5
for
25500742

.
mtr-u.5
for
11437198

.


Ortholog ID: 3786
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol SPA1 SPA2 LOC100776980 LOC100799267 LOC101249027 LOC101263834 LOC4339663 LOC100384276 LOC103635349 LOC103858211 LOC103833904 LOC100256812 LOC100257085 LOC7479329 LOC7492759 LOC25500742 LOC11437198 LOC123147298 LOC123183200 LOC123451067 LOC107947084 LOC107947107 LOC106439695 LOC106450516 CHLRE_13g602700v5 LOC8074618 LOC102593062 LOC102597285 LOC102621189 LOC100822627 LOC107800631 LOC107773506
Function* SPA (suppressor of phyA-105) protein family SPA1-related 2 protein SPA1-RELATED 2 protein SUPPRESSOR OF PHYA-105 1 protein SUPPRESSOR OF PHYA-105 1-like protein SPA1-RELATED 2 protein SUPPRESSOR OF PHYA-105 1 Protein SUPPRESSOR OF PHYA-105 1 protein SUPPRESSOR OF PHYA-105 1 protein SUPPRESSOR OF PHYA-105 1 protein SPA1-RELATED 2 protein SUPPRESSOR OF PHYA-105 1 protein SPA1-RELATED 2 protein SPA1-RELATED 2 protein SUPPRESSOR OF PHYA-105 1 protein SUPPRESSOR OF PHYA-105 1 protein SPA1-RELATED 2 protein SUPPRESSOR OF PHYA-105 1 protein SUPPRESSOR OF PHYA-105 1 protein SUPPRESSOR OF PHYA-105 1-like protein SPA1-RELATED 2 protein SPA1-RELATED 2 protein SPA1-RELATED 2 protein SUPPRESSOR OF PHYA-105 1 uncharacterized protein protein SUPPRESSOR OF PHYA-105 1 protein SUPPRESSOR OF PHYA-105 1-like protein SPA1-RELATED 2 protein SPA1-RELATED 2 protein SUPPRESSOR OF PHYA-105 1 protein SPA1-RELATED 2 protein SPA1-RELATED 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 3
bra03250 Viral life cycle - HIV-1 3
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi03460 Fanconi anemia pathway 2
ghi04712 Circadian rhythm - plant 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi03083 Polycomb repressive complex 4
ghi03250 Viral life cycle - HIV-1 4
ghi03018 RNA degradation 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04712 Circadian rhythm - plant 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 6
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta03040 Spliceosome 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta03040 Spliceosome 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819242 826712 100776980 100799267 101249027 101263834 4339663 100384276 103635349 103858211 103833904 100256812 100257085 7479329 7492759 25500742 11437198 123147298 123183200 123451067 107947084 107947107 106439695 106450516 66056099 8074618 102593062 102597285 102621189 100822627 107800631 107773506
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