Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100837599   cystathionine gamma-synthase 1, chloroplastic 
 zma-u.5   100191523   uncharacterized LOC100191523 
 sbi-r.1   8080479   cystathionine gamma-synthase 1, chloroplastic 
 sbi-r.1   8059635   probable cystathionine gamma-synthase 2 
 ath-u.5   MTO1   Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 
 gma-u.5   CGS1   cystathionine gamma-synthase 1, chloroplastic 
 gma-u.5   CGS2   cystathionine-gamma-synthase 
 sly-u.5   CGS   cystathionine gamma synthase 
 bra-r.6   103858929   cystathionine gamma-synthase 1, chloroplastic 
 bra-r.6   103870949   cystathionine gamma-synthase 1, chloroplastic 
 vvi-u.5   100267880   cystathionine gamma-synthase 1, chloroplastic 
 ppo-u.5   7482488   cystathionine gamma-synthase 1, chloroplastic 
 mtr-u.5   11427680   cystathionine gamma-synthase 1, chloroplastic 
 mtr-u.5   11406997   cystathionine gamma-synthase 1, chloroplastic 
 ghi-r.1   107943482   cystathionine gamma-synthase 1, chloroplastic 
 ghi-r.1   107940600   cystathionine gamma-synthase 1, chloroplastic 
 ghi-r.1   107955507   cystathionine gamma-synthase 1, chloroplastic 
 bna-r.1   106388653   cystathionine gamma-synthase 1, chloroplastic 
 bna-r.1   106438910   cystathionine gamma-synthase 1, chloroplastic 
 sot-r.1   CGS2   cystathionine gamma-synthase 
 sot-r.1   102601571   cystathionine gamma-synthase 1, chloroplastic-like 
 cit-r.1   102621879   cystathionine gamma-synthase 1, chloroplastic 
 nta-r.1   107774020   cystathionine gamma-synthase 1, chloroplastic-like 
 nta-r.1   107814266   cystathionine gamma-synthase 1, chloroplastic-like 
 nta-r.1   107822634   cystathionine gamma-synthase 1, chloroplastic-like 
 cre-r.1   CHLRE_03g144627v5   uncharacterized protein 

close


Top 50 coexpressed genes to 100837599 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100837599 (bdi-r.1 coexpression data)

CoexMap"123184451"


taeLOC123184451 | Entrez gene ID : 123184451    
Species bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre osa hvu tae
Paralog 1 1 2 1 2 1 2 1 1 2 3 2 2 1 3 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00270 [list] [network] Cysteine and methionine metabolism (411 genes)
GO BP
GO:0019346 [list] [network] transsulfuration  (26 genes)  IEA  
GO:0009086 [list] [network] methionine biosynthetic process  (69 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1890 genes)  IEA  
GO MF
GO:0003962 [list] [network] cystathionine gamma-synthase activity  (17 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (321 genes)  IEA  
Protein XP_044452496.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  vacu 1,  E.R. 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_044452496.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for XP_044452496.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100837599
zma-u.5
for
100191523
sbi-r.1
for
8080479
sbi-r.1
for
8059635
ath-u.5
for
MTO1
gma-u.5
for
CGS1
gma-u.5
for
CGS2
sly-u.5
for
CGS
bra-r.6
for
103858929
bra-r.6
for
103870949
vvi-u.5
for
100267880
ppo-u.5
for
7482488
mtr-u.5
for
11427680
mtr-u.5
for
11406997
ghi-r.1
for
107943482
ghi-r.1
for
107940600
ghi-r.1
for
107955507
bna-r.1
for
106388653
bna-r.1
for
106438910
sot-r.1
for
CGS2
sot-r.1
for
102601571
cit-r.1
for
102621879
nta-r.1
for
107774020
nta-r.1
for
107814266
nta-r.1
for
107822634
cre-r.1
for
CHLRE_03g144627v5


Ortholog ID: 2149
Species hvu bdi osa zma zma sbi sbi ath gma gma sly bra bra vvi ppo mtr mtr ghi ghi ghi bna bna sot sot cit nta nta nta cre
Symbol LOC123448483 LOC100837599 LOC4332956 LOC100191523 LOC541650 LOC8080479 LOC8059635 MTO1 CGS1 CGS2 CGS LOC103858929 LOC103870949 LOC100267880 LOC7482488 LOC11427680 LOC11406997 LOC107943482 LOC107955507 LOC107949182 LOC106453252 LOC125587586 CGS2 LOC102601571 LOC102621879 LOC107774020 LOC107814266 LOC107822634 CHLRE_03g144627v5
Function* cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic uncharacterized LOC100191523 cystathionine gamma-synthase 1 cystathionine gamma-synthase 1, chloroplastic probable cystathionine gamma-synthase 2 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein cystathionine gamma-synthase 1, chloroplastic cystathionine-gamma-synthase cystathionine gamma synthase cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic-like cystathionine gamma-synthase cystathionine gamma-synthase 1, chloroplastic-like cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic-like cystathionine gamma-synthase 1, chloroplastic-like cystathionine gamma-synthase 1, chloroplastic-like uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu03010 Ribosome 3
hvu00710 Carbon fixation by Calvin cycle 2
hvu01230 Biosynthesis of amino acids 2
hvu00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 4
bdi01230 Biosynthesis of amino acids 4
bdi00250 Alanine, aspartate and glutamate metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 5
osa01240 Biosynthesis of cofactors 4
osa00010 Glycolysis / Gluconeogenesis 3
osa00785 Lipoic acid metabolism 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01210 2-Oxocarboxylic acid metabolism 11
ath00966 Glucosinolate biosynthesis 10
ath01230 Biosynthesis of amino acids 7
ath00290 Valine, leucine and isoleucine biosynthesis 6
ath00270 Cysteine and methionine metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00920 Sulfur metabolism 5
gma01320 Sulfur cycle 5
gma00900 Terpenoid backbone biosynthesis 3
gma01230 Biosynthesis of amino acids 3
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00900 Terpenoid backbone biosynthesis 2
gma00270 Cysteine and methionine metabolism 2
gma00220 Arginine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 7
sly00010 Glycolysis / Gluconeogenesis 5
sly00620 Pyruvate metabolism 4
sly01240 Biosynthesis of cofactors 4
sly00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 7
bra01230 Biosynthesis of amino acids 6
bra01200 Carbon metabolism 6
bra00966 Glucosinolate biosynthesis 4
bra01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 6
bra01230 Biosynthesis of amino acids 6
bra00966 Glucosinolate biosynthesis 6
bra01210 2-Oxocarboxylic acid metabolism 6
bra00920 Sulfur metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi01210 2-Oxocarboxylic acid metabolism 3
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00020 Citrate cycle (TCA cycle) 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo00020 Citrate cycle (TCA cycle) 3
ppo00190 Oxidative phosphorylation 2
ppo04814 Motor proteins 2
ppo00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 10
mtr00270 Cysteine and methionine metabolism 6
mtr00670 One carbon pool by folate 5
mtr01240 Biosynthesis of cofactors 4
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot00190 Oxidative phosphorylation 2
sot04142 Lysosome 2
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 4
sot00020 Citrate cycle (TCA cycle) 4
sot00620 Pyruvate metabolism 4
sot00785 Lipoic acid metabolism 4
sot01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit01230 Biosynthesis of amino acids 3
cit00260 Glycine, serine and threonine metabolism 2
cit00270 Cysteine and methionine metabolism 2
cit00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 5
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00270 Cysteine and methionine metabolism 3
nta00500 Starch and sucrose metabolism 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 5
nta04626 Plant-pathogen interaction 4
nta00790 Folate biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123448483 100837599 4332956 100191523 541650 8080479 8059635 821292 100794584 548023 543920 103858929 103870949 100267880 7482488 11427680 11406997 107943482 107955507 107949182 106453252 125587586 102577796 102601571 102621879 107774020 107814266 107822634 5721297
The preparation time of this page was 0.2 [sec].