ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100839634	splicing factor U2af large subunit B
ath-u.5	AT1G60830	RNA-binding (RRM/RBD/RNP motifs) family protein
bna-r.1	106353725	splicing factor U2af large subunit A

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003676 [list] [network] nucleic acid binding

(11810 genes)

IEA

Protein

XP_044452800.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 2, cysk 1, cyto 1, extr 1, cysk_plas 1

(predict for XP_044452800.1)

Subcellular
localization
TargetP

other 8

(predict for XP_044452800.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100839634	ath-u.5 for AT1G60830	bna-r.1 for 106353725

Ortholog ID: 16858

Species

bdi

ath

bna

Symbol

LOC100839634

AT1G60830

LOC106353725

Function^*

splicing factor U2af large subunit B

RNA-binding (RRM/RBD/RNP motifs) family protein

splicing factor U2af large subunit A

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	5

Expression

Expression pattern

Entrez Gene ID^*

100839634

842376

106353725


Species	bdi	ath	bna	vvi	ppo	sbi	gma	ghi	cit	hvu	sot	sly	nta	osa	tae	zma	cre	mtr	bra
Paralog	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100839634 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100839634 (bdi-r.1 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100839634 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100839634 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**