ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123074359	aquaporin TIP4-4
tae-r.2	123072891	probable aquaporin TIP1-2
hvu-r.1	123449696	aquaporin TIP1-1
hvu-r.1	123445739	probable aquaporin TIP1-2
bdi-r.1	100823771	probable aquaporin TIP2-1
bdi-r.1	100843246	probable aquaporin TIP1-2
bdi-r.1	100838472	probable aquaporin TIP4-1
osa-u.5	4324303	probable aquaporin TIP1-2
osa-u.5	4348981	probable aquaporin TIP3-1
zma-u.5	541687	porin 2
zma-u.5	541893	tonoplast intrinsic protein 2
sbi-r.1	8076232	aquaporin TIP2-1
ath-u.5	GAMMA-TIP	gamma tonoplast intrinsic protein
ath-u.5	DELTA-TIP	delta tonoplast integral protein
gma-u.5	TIP4-1	aquaporin TIP4-1
gma-u.5	100814469	aquaporin TIP3-3
sly-u.5	101267949	aquaporin TIP1-1
sly-u.5	778315	aquaporin-like
sly-u.5	TIP2-2	tonoplast intrinsic protein 2.2
bra-r.6	103864690	aquaporin TIP4-1
bra-r.6	103842731	probable aquaporin TIP3-2
bra-r.6	103853812	aquaporin TIP2-3
vvi-u.5	TIP1;2	aquaporin-like
vvi-u.5	TIP2;1	aquaporin TIP2;1
vvi-u.5	100263698	aquaporin TIP1-1
ppo-u.5	7468799	aquaporin TIP1-1
ppo-u.5	7463322	aquaporin TIP1-1
mtr-u.5	11433452	aquaporin TIP2-1
mtr-u.5	11435009	aquaporin TIP2-1
ghi-r.1	107929356	probable aquaporin TIP-type
ghi-r.1	107931794	probable aquaporin TIP1-2
ghi-r.1	107932296	probable aquaporin TIP-type
bna-r.1	125591271	probable aquaporin TIP3-2
bna-r.1	106452220	aquaporin TIP2-1
bna-r.1	125585648	aquaporin TIP1-1
sot-r.1	102591890	probable aquaporin TIP1-1
sot-r.1	102603645	aquaporin TIP2-1
sot-r.1	102602512	probable aquaporin TIP3-2
cit-r.1	102611770	aquaporin TIP4-1
cit-r.1	102621052	aquaporin TIP1-3
cit-r.1	102625627	aquaporin TIP3-1-like
nta-r.1	107802859	putative aquaporin TIP-type RB7-18C
nta-r.1	107801866	aquaporin TIP2-1-like
nta-r.1	107794022	aquaporin TIP1-1-like
cre-r.1	CHLRE_12g549300v5	uncharacterized protein

Top 50 coexpressed genes to 123074359 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123074359 (tae-r.2 coexpression data)

CoexMap"123185876"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006833 [list] [network] water transport	(32 genes)	IEA
GO:0055085 [list] [network] transmembrane transport	(3218 genes)	IEA

GO CC

GO:0016020 [list] [network] membrane

(10843 genes)

IEA

GO MF

GO:0015250 [list] [network] water channel activity

(35 genes)

IEA

Protein

XP_044453626.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, plas 1, E.R. 1, E.R._plas 1

(predict for XP_044453626.1)

Subcellular
localization
TargetP

mito 3

(predict for XP_044453626.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123074359	tae-r.2 for 123072891	hvu-r.1 for 123449696	hvu-r.1 for 123445739	bdi-r.1 for 100823771	bdi-r.1 for 100843246	bdi-r.1 for 100838472	osa-u.5 for 4324303	osa-u.5 for 4348981	zma-u.5 for 541687	zma-u.5 for 541893	sbi-r.1 for 8076232	ath-u.5 for GAMMA-TIP	ath-u.5 for DELTA-TIP	gma-u.5 for TIP4-1	gma-u.5 for 100814469	sly-u.5 for 101267949	sly-u.5 for 778315	sly-u.5 for TIP2-2	bra-r.6 for 103864690	bra-r.6 for 103842731	bra-r.6 for 103853812	vvi-u.5 for TIP1;2	vvi-u.5 for TIP2;1	vvi-u.5 for 100263698	ppo-u.5 for 7468799	ppo-u.5 for 7463322	mtr-u.5 for 11433452	mtr-u.5 for 11435009	ghi-r.1 for 107929356	ghi-r.1 for 107931794	ghi-r.1 for 107932296	bna-r.1 for 125591271	bna-r.1 for 106452220	bna-r.1 for 125585648	sot-r.1 for 102591890	sot-r.1 for 102603645	sot-r.1 for 102602512	cit-r.1 for 102611770	cit-r.1 for 102621052	cit-r.1 for 102625627	nta-r.1 for 107802859	nta-r.1 for 107801866	nta-r.1 for 107794022	cre-r.1 for CHLRE_12g549300v5

Ortholog

Ortholog ID: 83

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

mtr

ghi

bna

sot

cit

nta

cre

Symbol

TIP2;2

TIP2-2

TIP1;2

TIP1;1

Function^*

aquaporin TIP2-3

probable aquaporin TIP2-2

probable aquaporin TIP4-1

probable aquaporin TIP3-1

probable aquaporin TIP4-1

probable aquaporin TIP4-2

probable aquaporin TIP4-3

probable aquaporin TIP3-1

probable aquaporin TIP1-1

probable aquaporin TIP3-2

aquaporin TIP4-2-like

aquaporin TIP2-3-like

aquaporin TIP4-4

aquaporin TIP4-2

gamma tonoplast intrinsic protein

tonoplast intrinsic protein 2;2

aquaporin TIP2-5

aquaporin-like

tonoplast intrinsic protein 2.2

probable aquaporin TIP5-1

probable aquaporin TIP2-2

probable aquaporin TIP3-2

aquaporin-like

aquaporin TIP1-1

aquaporin-like

aquaporin TIP2-1

aquaporin TIP4-1

probable aquaporin TIP-type RB7-5A

probable aquaporin TIP-type

aquaporin TIP1-1

probable aquaporin TIP1-2

aquaporin TIP3-1

aquaporin TIP1-3

probable aquaporin TIP3-2

aquaporin TIP2-1-like

aquaporin TIP1-1

aquaporin TIP4-1

probable aquaporin TIP2-2

aquaporin TIP2-1

aquaporin TIP2-1-like

putative aquaporin TIP-type RB7-18C

putative aquaporin TIP1-1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	3
tae00561	Glycerolipid metabolism	3
tae00600	Sphingolipid metabolism	3
tae00603	Glycosphingolipid biosynthesis - globo and isoglobo series	3
tae00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00073	Cutin, suberine and wax biosynthesis	2
bdi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	5
bdi00630	Glyoxylate and dicarboxylate metabolism	4
bdi04146	Peroxisome	3
bdi00250	Alanine, aspartate and glutamate metabolism	2
bdi00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	2
mtr00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot02010	ABC transporters	4
sot00940	Phenylpropanoid biosynthesis	4
sot00910	Nitrogen metabolism	2
sot00620	Pyruvate metabolism	2
sot00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00592	alpha-Linolenic acid metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00740	Riboflavin metabolism	2
nta04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

123041819

100037645

123449894

123409954

100838472

100838461

100844557

4348981

4331608

4336464

103635714

103646110

8078102

8066640

818255

827446

100805635

778315

101055566

101261595

103868228

103872561

100233004

100263698

100233003

11435009

11432805

11428968

107929356

121216027

121212692

106399493

106426631

102602512

102596615

102589703

102611770

102627157

102624065

107801866

107802889

107830277

5719640

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	2	3	2	2	1	2	2	3	3	3	2	2	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123074359 (tae-r.2 coexpression data)

Top 50 enrichment test to 123074359 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**