ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123394968	uncharacterized LOC123394968
tae-r.2	123114198	uncharacterized LOC123114198
tae-r.2	123087735	uncharacterized LOC123087735
bdi-r.1	100828669	uncharacterized LOC100828669
osa-u.5	4334719	uncharacterized LOC4334719
zma-u.5	100272501	uncharacterized LOC100272501
sbi-r.1	8080178	uncharacterized LOC8080178
ath-u.5	AT4G09620	Mitochondrial transcription termination factor family protein
gma-u.5	100797265	uncharacterized LOC100797265
sly-u.5	101266895	uncharacterized LOC101266895
vvi-u.5	100241910	uncharacterized LOC100241910
ppo-u.5	18104463	uncharacterized LOC18104463
mtr-u.5	25484965	uncharacterized LOC25484965
ghi-r.1	107910500	uncharacterized LOC107910500
ghi-r.1	107951569	uncharacterized LOC107951569
bna-r.1	BNAC03G28640D	uncharacterized BNAC03G28640D
bna-r.1	106438491	uncharacterized LOC106438491
sot-r.1	102586721	uncharacterized LOC102586721
cit-r.1	102613002	uncharacterized LOC102613002
nta-r.1	107807165	uncharacterized LOC107807165
nta-r.1	107762901	uncharacterized LOC107762901
cre-r.1	CHLRE_10g445100v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(1721 genes)

IEA

GO CC

GO MF

GO:0003690 [list] [network] double-stranded DNA binding

(504 genes)

IEA

Protein

XP_044945809.1 [sequence] [blastp]
XP_044945810.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 3	(predict for XP_044945809.1)
chlo 7, extr 1, cyto 1, plas 1, cyto_plas 1	(predict for XP_044945810.1)

Subcellular
localization
TargetP

chlo 1	(predict for XP_044945809.1)
chlo 7, other 3	(predict for XP_044945810.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123394968	tae-r.2 for 123114198	tae-r.2 for 123087735	bdi-r.1 for 100828669	osa-u.5 for 4334719	zma-u.5 for 100272501	sbi-r.1 for 8080178	ath-u.5 for AT4G09620	gma-u.5 for 100797265	sly-u.5 for 101266895	vvi-u.5 for 100241910	ppo-u.5 for 18104463	mtr-u.5 for 25484965	ghi-r.1 for 107910500	ghi-r.1 for 107951569	bna-r.1 for BNAC03G28640D	bna-r.1 for 106438491	sot-r.1 for 102586721	cit-r.1 for 102613002	nta-r.1 for 107807165	nta-r.1 for 107762901	cre-r.1 for CHLRE_10g445100v5

Ortholog

Ortholog ID: 10174

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC123394968

uncharacterized LOC123114198

uncharacterized LOC123087735

uncharacterized LOC100828669

uncharacterized LOC4334719

uncharacterized LOC100272501

uncharacterized LOC8080178

Mitochondrial transcription termination factor family protein

uncharacterized LOC100797265

uncharacterized LOC101266895

uncharacterized LOC100241910

uncharacterized LOC18104463

uncharacterized LOC25484965

uncharacterized LOC107910500

uncharacterized LOC107951569

uncharacterized BNAC03G28640D

uncharacterized LOC106438491

uncharacterized LOC102586721

uncharacterized LOC102613002

uncharacterized LOC107807165

uncharacterized LOC107762901

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00910	Nitrogen metabolism	2
hvu01310	Nitrogen cycle	2
hvu00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00906	Carotenoid biosynthesis	3
tae00030	Pentose phosphate pathway	3
tae00040	Pentose and glucuronate interconversions	3
tae00710	Carbon fixation by Calvin cycle	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00053	Ascorbate and aldarate metabolism	3
tae01240	Biosynthesis of cofactors	3
tae00030	Pentose phosphate pathway	3
tae00040	Pentose and glucuronate interconversions	3
tae00710	Carbon fixation by Calvin cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00910	Nitrogen metabolism	5
osa01310	Nitrogen cycle	5
osa01240	Biosynthesis of cofactors	3
osa00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
osa00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00230	Purine metabolism	2
sbi00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00910	Nitrogen metabolism	4
ath01310	Nitrogen cycle	3
ath00030	Pentose phosphate pathway	2
ath00480	Glutathione metabolism	2
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	4
ppo04145	Phagosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2
mtr00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00310	Lysine degradation	2
ghi03083	Polycomb repressive complex	2
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	5
bna00053	Ascorbate and aldarate metabolism	2
bna00480	Glutathione metabolism	2
bna00630	Glyoxylate and dicarboxylate metabolism	2
bna00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	5
bna00053	Ascorbate and aldarate metabolism	2
bna00480	Glutathione metabolism	2
bna00630	Glyoxylate and dicarboxylate metabolism	2
bna00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01310	Nitrogen cycle	3
nta00900	Terpenoid backbone biosynthesis	2
nta00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01310	Nitrogen cycle	6
nta00910	Nitrogen metabolism	5
nta00920	Sulfur metabolism	3
nta00270	Cysteine and methionine metabolism	2
nta00460	Cyanoamino acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

123394968

123114198

123087735

100828669

4334719

100272501

8080178

826547

100797265

101266895

100241910

18104463

25484965

107910500

107951569

106423582

106438491

102586721

102613002

107807165

107762901

5715982

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123394968 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123394968 (hvu-r.1 coexpression data)


Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	sly	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	bra
Paralog	1	2	1	1	1	1	1	1	1	1	1	1	2	2	1	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123394968 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123394968 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**