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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123401073   DNA mismatch repair protein PMS1 
 osa-u.5   4329835   DNA mismatch repair protein PMS1 
 zma-u.5   103653697   DNA mismatch repair protein PMS1 
 ath-u.5   PMS1   DNA mismatch repair protein 
 gma-u.5   100802535   DNA mismatch repair protein PMS1 
 gma-u.5   100793891   DNA mismatch repair protein PMS1 
 sly-u.5   101258001   DNA mismatch repair protein PMS1 
 vvi-u.5   100255596   DNA mismatch repair protein PMS1 
 ppo-u.5   7457943   DNA mismatch repair protein PMS1 
 mtr-u.5   11414900   DNA mismatch repair protein PMS1 

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Top 50 coexpressed genes to 123401073 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123401073 (hvu-r.1 coexpression data)

CoexMap"123401073"


hvuLOC123401073 | Entrez gene ID : 123401073    
Species hvu osa zma ath gma sly vvi ppo mtr bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg03430 [list] [network] Mismatch repair (38 genes)
hvg03460 [list] [network] Fanconi anemia pathway (51 genes)
GO BP
GO:0006298 [list] [network] mismatch repair  (37 genes)  IEA  
GO CC
GO:0032389 [list] [network] MutLalpha complex  (20 genes)  IEA  
GO MF
GO:0030983 [list] [network] mismatched DNA binding  (16 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (40 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (576 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2546 genes)  IEA  
Protein XP_044950722.1 [sequence] [blastp]
XP_044950724.1 [sequence] [blastp]
XP_044950725.1 [sequence] [blastp]
XP_044950726.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cysk 1,  chlo 1,  cyto 1,  cysk_plas 1  (predict for XP_044950722.1)
nucl 7,  chlo 1,  cyto 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_044950724.1)
nucl 8,  chlo 1  (predict for XP_044950725.1)
nucl 9,  chlo 1,  cysk 1  (predict for XP_044950726.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_044950722.1)
other 4,  chlo 3  (predict for XP_044950724.1)
other 4,  chlo 3  (predict for XP_044950725.1)
other 4,  chlo 3  (predict for XP_044950726.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123401073
osa-u.5
for
4329835
zma-u.5
for
103653697
ath-u.5
for
PMS1
gma-u.5
for
100802535
gma-u.5
for
100793891
sly-u.5
for
101258001
vvi-u.5
for
100255596
ppo-u.5
for
7457943
mtr-u.5
for
11414900


Ortholog ID: 9033
Species hvu tae tae bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123401073 LOC123127556 LOC123137302 LOC100824722 LOC4329835 LOC103653697 LOC8055441 PMS1 LOC100793891 LOC100802535 LOC101258001 LOC103868208 LOC100255596 LOC7457943 LOC11414900 LOC107946086 LOC107931240 LOC106348839 LOC106399800 LOC102596485 LOC102625172 LOC107818778 LOC107787641 CHLRE_04g227000v5
Function* DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1-like DNA mismatch repair protein PMS1-like DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 DNA mismatch repair protein PMS1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03430 Mismatch repair 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03430 Mismatch repair 3
ath03410 Base excision repair 3
ath03450 Non-homologous end-joining 3
ath03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 5
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03430 Mismatch repair 2
gma03460 Fanconi anemia pathway 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 8
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 6
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03410 Base excision repair 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03430 Mismatch repair 3
ppo03460 Fanconi anemia pathway 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
mtr04120 Ubiquitin mediated proteolysis 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 2
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 14
bna03430 Mismatch repair 3
bna03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 14
bna03430 Mismatch repair 3
bna03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 3
nta03460 Fanconi anemia pathway 3
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 3
nta03460 Fanconi anemia pathway 3
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123401073 123127556 123137302 100824722 4329835 103653697 8055441 827997 100793891 100802535 101258001 103868208 100255596 7457943 11414900 107946086 107931240 106348839 106399800 102596485 102625172 107818778 107787641 5717917
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