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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123401689   uncharacterized LOC123401689 
 hvu-r.1   123411230   E3 ubiquitin-protein ligase RLIM-like 
 tae-r.2   123165859   probable E3 ubiquitin-protein ligase RHG1A 
 tae-r.2   123136313   E3 ubiquitin-protein ligase RLIM 
 tae-r.2   123160576   probable E3 ubiquitin-protein ligase RHG1A 
 bdi-r.1   100835307   E3 ubiquitin-protein ligase Praja-1 
 bdi-r.1   100824004   uncharacterized LOC100824004 
 osa-u.5   4341936   uncharacterized LOC4341936 
 osa-u.5   4328312   probable E3 ubiquitin-protein ligase RHG1A 
 zma-u.5   100381944   RING/U-box superfamily protein 
 sbi-r.1   8063811   uncharacterized LOC8063811 
 sbi-r.1   8074641   probable E3 ubiquitin-protein ligase HIP1 
 ath-u.5   AT4G31450   RING/U-box superfamily protein 
 ath-u.5   AT5G10650   RING/U-box superfamily protein 
 ath-u.5   AT5G24870   RING/U-box superfamily protein 
 gma-u.5   100803211   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100812055   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100819874   E3 ubiquitin-protein ligase MBR2 
 sly-u.5   101266656   probable E3 ubiquitin-protein ligase RHG1A 
 sly-u.5   101255868   probable E3 ubiquitin-protein ligase RHG1A 
 bra-r.6   103855877   E3 ubiquitin-protein ligase MBR2 
 bra-r.6   103862052   E3 ubiquitin-protein ligase Iruka 
 bra-r.6   103846786   E3 ubiquitin-protein ligase MBR2 
 vvi-u.5   100245643   uncharacterized LOC100245643 
 ppo-u.5   18107536   probable E3 ubiquitin-protein ligase RHG1A 
 ppo-u.5   18100754   E3 ubiquitin-protein ligase MBR2 
 mtr-u.5   11433343   uncharacterized LOC11433343 
 mtr-u.5   25490046   E3 ubiquitin-protein ligase MBR2 
 ghi-r.1   107893481   uncharacterized LOC107893481 
 ghi-r.1   107902017   E3 ubiquitin-protein ligase MBR2 
 ghi-r.1   107906773   probable E3 ubiquitin-protein ligase RHG1A 
 bna-r.1   106380724   probable E3 ubiquitin-protein ligase HIP1 
 bna-r.1   106372458   E3 ubiquitin-protein ligase MBR2 
 bna-r.1   111198504   E3 ubiquitin-protein ligase MBR2 
 sot-r.1   102581264   uncharacterized protein DDB_G0292642-like 
 sot-r.1   102582551   E3 ubiquitin-protein ligase RLIM 
 sot-r.1   102603878   E3 ubiquitin-protein ligase RLIM-like 
 cit-r.1   102627859   hypothetical protein 
 nta-r.1   107764972   uncharacterized LOC107764972 
 nta-r.1   107799480   uncharacterized LOC107799480 
 nta-r.1   107791608   uncharacterized LOC107791608 

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Top 50 coexpressed genes to 123401689 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123401689 (hvu-r.1 coexpression data)

CoexMap"123401689"


hvuLOC123401689 | Entrez gene ID : 123401689    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 2 2 1 2 3 3 2 3 1 2 2 3 3 3 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (217 genes)  IEA  
Protein XP_044951469.1 [sequence] [blastp]
XP_044951470.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for XP_044951469.1)
nucl 9,  cyto 1,  vacu 1  (predict for XP_044951470.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_044951469.1)
mito 8  (predict for XP_044951470.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123401689
hvu-r.1
for
123411230
tae-r.2
for
123165859
tae-r.2
for
123136313
tae-r.2
for
123160576
bdi-r.1
for
100835307
bdi-r.1
for
100824004
osa-u.5
for
4341936
osa-u.5
for
4328312
zma-u.5
for
100381944
sbi-r.1
for
8063811
sbi-r.1
for
8074641
ath-u.5
for
AT4G31450
ath-u.5
for
AT5G10650
ath-u.5
for
AT5G24870
gma-u.5
for
100803211
gma-u.5
for
100812055
gma-u.5
for
100819874
sly-u.5
for
101266656
sly-u.5
for
101255868
bra-r.6
for
103855877
bra-r.6
for
103862052
bra-r.6
for
103846786
vvi-u.5
for
100245643
ppo-u.5
for
18107536
ppo-u.5
for
18100754
mtr-u.5
for
11433343
mtr-u.5
for
25490046
ghi-r.1
for
107893481
ghi-r.1
for
107902017
ghi-r.1
for
107906773
bna-r.1
for
106380724
bna-r.1
for
106372458
bna-r.1
for
111198504
sot-r.1
for
102581264
sot-r.1
for
102582551
sot-r.1
for
102603878
cit-r.1
for
102627859
nta-r.1
for
107764972
nta-r.1
for
107799480
nta-r.1
for
107791608


Ortholog ID: 1632
Species hvu hvu tae tae tae bdi bdi osa osa sbi sbi ath ath ath gma gma gma sly sly bra bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot sot cit nta nta nta
Symbol LOC123401689 LOC123411230 LOC123136313 LOC123160576 LOC123132266 LOC100835307 LOC100824004 LOC4341936 LOC4328312 LOC8063811 LOC8074641 AT4G31450 AT5G10650 AT5G24870 LOC100803211 LOC100812055 LOC100787213 LOC101266656 LOC101255868 LOC103855877 LOC103862052 LOC103874353 LOC100245643 LOC18107536 LOC18100754 LOC11433343 LOC25490046 LOC107902017 LOC107932989 LOC107962701 LOC106412562 LOC106420498 LOC106430239 LOC102581264 LOC102582551 LOC102603878 LOC102627859 LOC107764972 LOC107799480 LOC107766429
Function* uncharacterized LOC123401689 E3 ubiquitin-protein ligase RLIM-like E3 ubiquitin-protein ligase RLIM probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase RLIM E3 ubiquitin-protein ligase Praja-1 uncharacterized LOC100824004 uncharacterized LOC4341936 probable E3 ubiquitin-protein ligase RHG1A uncharacterized LOC8063811 probable E3 ubiquitin-protein ligase HIP1 RING/U-box superfamily protein RING/U-box superfamily protein RING/U-box superfamily protein probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase Iruka E3 ubiquitin-protein ligase MBR1 uncharacterized LOC100245643 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 uncharacterized LOC11433343 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 uncharacterized LOC107932989 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase Iruka E3 ubiquitin-protein ligase MBR2-like uncharacterized protein DDB_G0292642-like E3 ubiquitin-protein ligase RLIM E3 ubiquitin-protein ligase RLIM-like hypothetical protein uncharacterized LOC107764972 uncharacterized LOC107799480 uncharacterized LOC107766429
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04146 Peroxisome 2
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00071 Fatty acid degradation 4
osa01212 Fatty acid metabolism 4
osa00592 alpha-Linolenic acid metabolism 3
osa04146 Peroxisome 3
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04626 Plant-pathogen interaction 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma00564 Glycerophospholipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
bra00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 3
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 3
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 4
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
bna00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot00280 Valine, leucine and isoleucine degradation 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00071 Fatty acid degradation 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04016 MAPK signaling pathway - plant 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
nta00910 Nitrogen metabolism 2
nta04075 Plant hormone signal transduction 2
nta00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123401689 123411230 123136313 123160576 123132266 100835307 100824004 4341936 4328312 8063811 8074641 829272 830929 832556 100803211 100812055 100787213 101266656 101255868 103855877 103862052 103874353 100245643 18107536 18100754 11433343 25490046 107902017 107932989 107962701 106412562 106420498 106430239 102581264 102582551 102603878 102627859 107764972 107799480 107766429
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