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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123403449   probable tocopherol O-methyltransferase, chloroplastic 
 tae-r.2   123128104   probable tocopherol O-methyltransferase, chloroplastic 
 tae-r.2   123137891   probable tocopherol O-methyltransferase, chloroplastic 
 tae-r.2   780621   probable tocopherol O-methyltransferase, chloroplastic 
 bdi-r.1   100836877   probable tocopherol O-methyltransferase, chloroplastic 
 osa-u.5   4330437   probable tocopherol O-methyltransferase, chloroplastic 
 zma-u.5   732837   vitamin E synthesis4 
 sbi-r.1   8067143   probable tocopherol O-methyltransferase, chloroplastic 
 sbi-r.1   8073167   probable tocopherol O-methyltransferase, chloroplastic 
 sbi-r.1   8079111   probable tocopherol O-methyltransferase, chloroplastic 
 ath-u.5   G-TMT   gamma-tocopherol methyltransferase 
 gma-u.5   732543   gamma-tocopherol methyltransferase 
 gma-u.5   GAMMA-TMT   gamma-tocopherol methyltransferase 
 gma-u.5   100778509   probable tocopherol O-methyltransferase, chloroplastic 
 sly-u.5   TMT   gamma-tocopherol methyltransferase 
 bra-r.6   103852208   tocopherol O-methyltransferase, chloroplastic 
 bra-r.6   103853294   tocopherol O-methyltransferase, chloroplastic 
 vvi-u.5   100242641   probable tocopherol O-methyltransferase, chloroplastic 
 ppo-u.5   7465624   probable tocopherol O-methyltransferase, chloroplastic 
 mtr-u.5   25481971   tocopherol O-methyltransferase, chloroplastic 
 ghi-r.1   107920515   tocopherol O-methyltransferase, chloroplastic 
 ghi-r.1   107951798   tocopherol O-methyltransferase, chloroplastic 
 ghi-r.1   121215348   tocopherol O-methyltransferase, chloroplastic 
 bna-r.1   106406285   tocopherol O-methyltransferase, chloroplastic-like 
 bna-r.1   125574762   tocopherol O-methyltransferase, chloroplastic-like 
 bna-r.1   106390439   tocopherol O-methyltransferase, chloroplastic-like 
 sot-r.1   GAMMA-TMT   gamma-tocopherol methyltransferase 
 cit-r.1   102628754   probable tocopherol O-methyltransferase, chloroplastic 
 nta-r.1   107809106   gamma-tocopherol methyltransferase, chloroplastic 
 nta-r.1   107804296   gamma-tocopherol methyltransferase, chloroplastic-like 
 nta-r.1   107793279   gamma-tocopherol methyltransferase, chloroplastic 
 cre-r.1   CHLRE_09g393400v5   uncharacterized protein 

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Top 50 coexpressed genes to 123403449 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123403449 (hvu-r.1 coexpression data)

CoexMap"123403449"


hvuLOC123403449 | Entrez gene ID : 123403449    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 3 1 3 1 2 1 1 1 3 3 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (65 genes)
hvg01240 [list] [network] Biosynthesis of cofactors (287 genes)
GO BP
GO:0032259 [list] [network] methylation  (174 genes)  IEA  
GO CC
GO MF
GO:0008757 [list] [network] S-adenosylmethionine-dependent methyltransferase activity  (207 genes)  IEA  
Protein XP_044953324.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_044953324.1)
Subcellular
localization
TargetP
chlo 9,  mito 4  (predict for XP_044953324.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123403449
tae-r.2
for
123128104
tae-r.2
for
123137891
tae-r.2
for
780621
bdi-r.1
for
100836877
osa-u.5
for
4330437
zma-u.5
for
732837
sbi-r.1
for
8067143
sbi-r.1
for
8073167
sbi-r.1
for
8079111
ath-u.5
for
G-TMT
gma-u.5
for
732543
gma-u.5
for
GAMMA-TMT
gma-u.5
for
100778509
sly-u.5
for
TMT
bra-r.6
for
103852208
bra-r.6
for
103853294
vvi-u.5
for
100242641
ppo-u.5
for
7465624
mtr-u.5
for
25481971
ghi-r.1
for
107920515
ghi-r.1
for
107951798
ghi-r.1
for
121215348
bna-r.1
for
106406285
bna-r.1
for
125574762
bna-r.1
for
106390439
sot-r.1
for
GAMMA-TMT
cit-r.1
for
102628754
nta-r.1
for
107809106
nta-r.1
for
107804296
nta-r.1
for
107793279
cre-r.1
for
CHLRE_09g393400v5


Ortholog ID: 6432
Species hvu tae tae tae bdi osa zma sbi sbi sbi ath gma gma gma sly bra bra vvi ppo mtr ghi ghi ghi bna bna bna sot cit nta nta nta cre
Symbol LOC123403449 LOC123128104 LOC123137891 LOC780621 LOC100836877 LOC4330437 LOC732837 LOC8067143 LOC8073167 LOC8079111 G-TMT LOC732543 GAMMA-TMT LOC100778509 TMT LOC103852208 LOC103853294 LOC100242641 LOC7465624 LOC25481971 LOC107920515 LOC107951798 LOC121215348 LOC106406285 LOC125574762 LOC106390439 GAMMA-TMT LOC102628754 LOC107809106 LOC107804296 LOC107793279 CHLRE_09g393400v5
Function* probable tocopherol O-methyltransferase, chloroplastic probable tocopherol O-methyltransferase, chloroplastic probable tocopherol O-methyltransferase, chloroplastic probable tocopherol O-methyltransferase, chloroplastic probable tocopherol O-methyltransferase, chloroplastic probable tocopherol O-methyltransferase, chloroplastic vitamin E synthesis4 probable tocopherol O-methyltransferase, chloroplastic probable tocopherol O-methyltransferase, chloroplastic probable tocopherol O-methyltransferase, chloroplastic gamma-tocopherol methyltransferase gamma-tocopherol methyltransferase gamma-tocopherol methyltransferase probable tocopherol O-methyltransferase, chloroplastic gamma-tocopherol methyltransferase tocopherol O-methyltransferase, chloroplastic tocopherol O-methyltransferase, chloroplastic probable tocopherol O-methyltransferase, chloroplastic probable tocopherol O-methyltransferase, chloroplastic tocopherol O-methyltransferase, chloroplastic tocopherol O-methyltransferase, chloroplastic tocopherol O-methyltransferase, chloroplastic tocopherol O-methyltransferase, chloroplastic tocopherol O-methyltransferase, chloroplastic-like tocopherol O-methyltransferase, chloroplastic-like tocopherol O-methyltransferase, chloroplastic-like gamma-tocopherol methyltransferase probable tocopherol O-methyltransferase, chloroplastic gamma-tocopherol methyltransferase, chloroplastic gamma-tocopherol methyltransferase, chloroplastic-like gamma-tocopherol methyltransferase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00650 Butanoate metabolism 3
tae00660 C5-Branched dibasic acid metabolism 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 4
osa00710 Carbon fixation by Calvin cycle 2
osa01200 Carbon metabolism 2
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 5
sbi00053 Ascorbate and aldarate metabolism 3
sbi00620 Pyruvate metabolism 3
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 5
sbi00053 Ascorbate and aldarate metabolism 3
sbi00010 Glycolysis / Gluconeogenesis 3
sbi00620 Pyruvate metabolism 3
sbi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00941 Flavonoid biosynthesis 2
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 6
ath01240 Biosynthesis of cofactors 2
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma01240 Biosynthesis of cofactors 3
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00030 Pentose phosphate pathway 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi00195 Photosynthesis 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi00260 Glycine, serine and threonine metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00750 Vitamin B6 metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00460 Cyanoamino acid metabolism 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 5
bna01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 5
bna01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 5
bna01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 5
cit00010 Glycolysis / Gluconeogenesis 4
cit00020 Citrate cycle (TCA cycle) 4
cit00620 Pyruvate metabolism 4
cit00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta01240 Biosynthesis of cofactors 3
nta00061 Fatty acid biosynthesis 2
nta00071 Fatty acid degradation 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 4
nta00010 Glycolysis / Gluconeogenesis 3
nta00020 Citrate cycle (TCA cycle) 3
nta00620 Pyruvate metabolism 3
nta00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta01240 Biosynthesis of cofactors 3
nta00900 Terpenoid backbone biosynthesis 3
nta00061 Fatty acid biosynthesis 2
nta00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
cre01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123403449 123128104 123137891 780621 100836877 4330437 732837 8067143 8073167 8079111 842805 732543 100792443 100778509 778248 103852208 103853294 100242641 7465624 25481971 107920515 107951798 121215348 106406285 125574762 106390439 102577815 102628754 107809106 107804296 107793279 5720115
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