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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123403782   aspartate--tRNA ligase 2, cytoplasmic-like 
 osa-u.5   4330354   aspartate--tRNA ligase 2, cytoplasmic 
 zma-u.5   100279253   Aspartate--tRNA ligase 2 cytoplasmic 
 zma-u.5   100283444   Aspartate--tRNA ligase 2 cytoplasmic 
 ath-u.5   AT4G26870   Class II aminoacyl-tRNA and biotin synthetases superfamily protein 
 ath-u.5   AT4G31180   Class II aminoacyl-tRNA and biotin synthetases superfamily protein 
 gma-u.5   100811577   aspartate--tRNA ligase 2, cytoplasmic 
 gma-u.5   100788164   aspartate--tRNA ligase 2, cytoplasmic 
 sly-u.5   101247918   aspartate--tRNA ligase 2, cytoplasmic 
 vvi-u.5   104880230   uncharacterized LOC104880230 
 vvi-u.5   100262746   aspartate--tRNA ligase 2, cytoplasmic 
 ppo-u.5   7454925   aspartate--tRNA ligase 2, cytoplasmic 
 mtr-u.5   11427296   aspartate--tRNA ligase 2, cytoplasmic 

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Top 50 coexpressed genes to 123403782 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123403782 (hvu-r.1 coexpression data)

CoexMap"123403782"


hvuLOC123403782 | Entrez gene ID : 123403782    
Species hvu osa zma ath gma sly vvi ppo mtr bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 2 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg00970 [list] [network] Aminoacyl-tRNA biosynthesis (92 genes)
GO BP
GO:0006422 [list] [network] aspartyl-tRNA aminoacylation  (6 genes)  IEA  
GO CC
GO:0017101 [list] [network] aminoacyl-tRNA synthetase multienzyme complex  (10 genes)  IEA  
GO:0005829 [list] [network] cytosol  (938 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5514 genes)  IEA  
GO MF
GO:0004815 [list] [network] aspartate-tRNA ligase activity  (6 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2546 genes)  IEA  
Protein XP_044953628.1 [sequence] [blastp]
XP_044953629.1 [sequence] [blastp]
XP_044953630.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_044953628.1)
chlo 5,  mito 4  (predict for XP_044953629.1)
chlo 6,  mito 4  (predict for XP_044953630.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_044953628.1)
mito 8  (predict for XP_044953629.1)
mito 8  (predict for XP_044953630.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123403782
osa-u.5
for
4330354
zma-u.5
for
100279253
zma-u.5
for
100283444
ath-u.5
for
AT4G26870
ath-u.5
for
AT4G31180
gma-u.5
for
100811577
gma-u.5
for
100788164
sly-u.5
for
101247918
vvi-u.5
for
104880230
vvi-u.5
for
100262746
ppo-u.5
for
7454925
mtr-u.5
for
11427296


Ortholog ID: 4768
Species hvu hvu tae tae bdi bdi osa zma zma sbi ath ath gma gma sly bra bra vvi vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123403782 LOC123451957 LOC123111474 LOC123103284 LOC100832171 LOC100836819 LOC4330354 LOC100283444 LOC100279253 LOC110433962 AT4G31180 AT4G26870 LOC100811577 LOC100788164 LOC101247918 LOC103852042 LOC103862036 LOC100262746 LOC104880230 LOC7454925 LOC11427296 LOC107932972 LOC107930823 LOC106354716 LOC106452797 LOC102590401 LOC102625499 LOC107800111 LOC107767661 CHLRE_06g279150v5
Function* aspartate--tRNA ligase 2, cytoplasmic-like aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic Aspartate--tRNA ligase 2 cytoplasmic Aspartate--tRNA ligase 2 cytoplasmic aspartate--tRNA ligase 2, cytoplasmic-like Class II aminoacyl-tRNA and biotin synthetases superfamily protein Class II aminoacyl-tRNA and biotin synthetases superfamily protein aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic uncharacterized LOC104880230 aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic-like aspartate--tRNA ligase 2, cytoplasmic-like aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic aspartate--tRNA ligase 2, cytoplasmic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00260 Glycine, serine and threonine metabolism 4
tae01230 Biosynthesis of amino acids 4
tae00261 Monobactam biosynthesis 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00260 Glycine, serine and threonine metabolism 4
tae01230 Biosynthesis of amino acids 4
tae00261 Monobactam biosynthesis 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
zma03013 Nucleocytoplasmic transport 5
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 5
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma00500 Starch and sucrose metabolism 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03008 Ribosome biogenesis in eukaryotes 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly03050 Proteasome 6
sly01210 2-Oxocarboxylic acid metabolism 2
sly01230 Biosynthesis of amino acids 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 4
vvi03010 Ribosome 3
vvi04141 Protein processing in endoplasmic reticulum 3
vvi00260 Glycine, serine and threonine metabolism 2
vvi00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi00300 Lysine biosynthesis 2
ghi00470 D-Amino acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi00300 Lysine biosynthesis 2
ghi00470 D-Amino acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 8
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 3
sot04141 Protein processing in endoplasmic reticulum 2
sot00020 Citrate cycle (TCA cycle) 2
sot00785 Lipoic acid metabolism 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 13
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 10
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 6
cre01230 Biosynthesis of amino acids 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123403782 123451957 123111474 123103284 100832171 100836819 4330354 100283444 100279253 110433962 829246 828794 100811577 100788164 101247918 103852042 103862036 100262746 104880230 7454925 11427296 107932972 107930823 106354716 106452797 102590401 102625499 107800111 107767661 5720875
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