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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123404721   nuclear exosome regulator NRDE2 
 tae-r.2   123138386   nuclear exosome regulator NRDE2 
 tae-r.2   123128516   nuclear exosome regulator NRDE2 
 tae-r.2   123145640   nuclear exosome regulator NRDE2 
 bdi-r.1   100822966   protein NRDE2 homolog 
 osa-u.5   4330879   uncharacterized LOC4330879 
 zma-u.5   100274011   uncharacterized LOC100274011 
 sbi-r.1   8075217   protein NRDE2 homolog 
 ath-u.5   AT3G17740   uncharacterized protein 
 ath-u.5   AT3G17712   uncharacterized protein 
 gma-u.5   100812285   nuclear exosome regulator NRDE2 
 gma-u.5   100786596   nuclear exosome regulator NRDE2 
 sly-u.5   101265113   uncharacterized LOC101265113 
 bra-r.6   103869658   nuclear exosome regulator NRDE2 
 vvi-u.5   100255247   uncharacterized LOC100255247 
 ppo-u.5   18105579   uncharacterized LOC18105579 
 mtr-u.5   11415298   nuclear exosome regulator NRDE2 
 ghi-r.1   107908438   nuclear exosome regulator NRDE2 
 ghi-r.1   107887131   nuclear exosome regulator NRDE2 
 bna-r.1   106435958   nuclear exosome regulator NRDE2-like 
 bna-r.1   106435960   nuclear exosome regulator NRDE2-like 
 bna-r.1   106452014   nuclear exosome regulator NRDE2 
 sot-r.1   102606398   protein NRDE2 homolog 
 cit-r.1   102625661   uncharacterized LOC102625661 
 nta-r.1   107785207   uncharacterized LOC107785207 
 nta-r.1   107786802   uncharacterized LOC107786802 
 cre-r.1   CHLRE_13g589650v5   uncharacterized protein 

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Top 50 coexpressed genes to 123404721 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123404721 (hvu-r.1 coexpression data)

CoexMap"123404721"


hvuLOC123404721 | Entrez gene ID : 123404721    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 2 2 1 1 1 1 1 2 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1902369 [list] [network] negative regulation of RNA catabolic process  (4 genes)  IEA  
GO:0035194 [list] [network] regulatory ncRNA-mediated post-transcriptional gene silencing  (25 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (688 genes)  IEA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (70 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044954603.1 [sequence] [blastp]
XP_044954604.1 [sequence] [blastp]
XP_044954605.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 3,  cysk_nucl 3  (predict for XP_044954603.1)
nucl 5,  chlo 3,  cysk_nucl 3  (predict for XP_044954604.1)
nucl 5,  chlo 3,  cysk_nucl 3  (predict for XP_044954605.1)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for XP_044954603.1)
chlo 8,  other 4  (predict for XP_044954604.1)
chlo 8,  other 4  (predict for XP_044954605.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123404721
tae-r.2
for
123138386
tae-r.2
for
123128516
tae-r.2
for
123145640
bdi-r.1
for
100822966
osa-u.5
for
4330879
zma-u.5
for
100274011
sbi-r.1
for
8075217
ath-u.5
for
AT3G17740
ath-u.5
for
AT3G17712
gma-u.5
for
100812285
gma-u.5
for
100786596
sly-u.5
for
101265113
bra-r.6
for
103869658
vvi-u.5
for
100255247
ppo-u.5
for
18105579
mtr-u.5
for
11415298
ghi-r.1
for
107908438
ghi-r.1
for
107887131
bna-r.1
for
106435958
bna-r.1
for
106435960
bna-r.1
for
106452014
sot-r.1
for
102606398
cit-r.1
for
102625661
nta-r.1
for
107785207
nta-r.1
for
107786802
cre-r.1
for
CHLRE_13g589650v5


Ortholog ID: 8944
Species hvu tae tae tae bdi osa zma sbi ath ath gma gma sly bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC123404721 LOC123138386 LOC123128516 LOC123145640 LOC100822966 LOC4330879 LOC100274011 LOC8075217 AT3G17740 AT3G17712 LOC100812285 LOC100786596 LOC101265113 LOC103869658 LOC100255247 LOC18105579 LOC11415298 LOC107908438 LOC107887131 LOC106435958 LOC106435960 LOC106452014 LOC102606398 LOC102625661 LOC107785207 LOC107786802 CHLRE_13g589650v5
Function* nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 protein NRDE2 homolog uncharacterized LOC4330879 uncharacterized LOC100274011 protein NRDE2 homolog uncharacterized protein uncharacterized protein nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 uncharacterized LOC101265113 nuclear exosome regulator NRDE2 uncharacterized LOC100255247 uncharacterized LOC18105579 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2-like nuclear exosome regulator NRDE2-like nuclear exosome regulator NRDE2 protein NRDE2 homolog uncharacterized LOC102625661 uncharacterized LOC107785207 uncharacterized LOC107786802 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi00020 Citrate cycle (TCA cycle) 2
sbi00785 Lipoic acid metabolism 2
sbi01200 Carbon metabolism 2
sbi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03083 Polycomb repressive complex 2
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03420 Nucleotide excision repair 2
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123404721 123138386 123128516 123145640 100822966 4330879 100274011 8075217 821042 7922332 100812285 100786596 101265113 103869658 100255247 18105579 11415298 107908438 107887131 106435958 106435960 106452014 102606398 102625661 107785207 107786802 66056064
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