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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123406239   cyclin-dependent kinase F-4-like 
 osa-u.5   4339927   cyclin-dependent kinase F-4-like 
 osa-u.5   4334774   cyclin-dependent kinase F-3-like 
 osa-u.5   4330434   cyclin-dependent kinase F-4-like 
 zma-u.5   100381504   putative protein kinase superfamily protein 
 zma-u.5   100274101   Serine/threonine-protein kinase MHK 
 zma-u.5   100272250   putative protein kinase superfamily protein 
 ath-u.5   MHK   Protein kinase superfamily protein 
 ath-u.5   AT4G19110   Protein kinase superfamily protein 
 ath-u.5   AT5G45430   Protein kinase superfamily protein 
 gma-u.5   100784474   cyclin-dependent kinase F-4 
 gma-u.5   100804781   serine/threonine-protein kinase MHK 
 gma-u.5   100810150   cyclin-dependent kinase F-4 
 sly-u.5   101245779   cyclin-dependent kinase F-4 
 sly-u.5   101252911   cyclin-dependent kinase F-4 
 sly-u.5   101253697   serine/threonine-protein kinase MHK 
 vvi-u.5   100241542   serine/threonine-protein kinase MHK 
 vvi-u.5   104882706   cyclin-dependent kinase F-4 
 ppo-u.5   7471169   serine/threonine-protein kinase MHK 
 ppo-u.5   7465471   cyclin-dependent kinase F-4 
 ppo-u.5   7462814   cyclin-dependent kinase F-4 
 mtr-u.5   11426323   cyclin-dependent kinase F-4 
 mtr-u.5   11434489   serine/threonine-protein kinase MHK 
 mtr-u.5   25501566   cyclin-dependent kinase F-4 

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Top 50 coexpressed genes to 123406239 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123406239 (hvu-r.1 coexpression data)

CoexMap"123406239"


hvuLOC123406239 | Entrez gene ID : 123406239    
Species hvu osa zma ath gma sly vvi ppo mtr bdi bra cit bna sbi ghi sot nta cre tae
Paralog 1 3 3 3 3 3 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0035556 [list] [network] intracellular signal transduction  (353 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (1478 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3241 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5514 genes)  IEA  
GO MF
GO:0004674 [list] [network] protein serine/threonine kinase activity  (489 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2546 genes)  IEA  
Protein XP_044955659.1 [sequence] [blastp]
XP_044955660.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  mito 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_044955659.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_044955660.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044955659.1)
other 9  (predict for XP_044955660.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123406239
osa-u.5
for
4339927
osa-u.5
for
4334774
osa-u.5
for
4330434
zma-u.5
for
100381504
zma-u.5
for
100274101
zma-u.5
for
100272250
ath-u.5
for
MHK
ath-u.5
for
AT4G19110
ath-u.5
for
AT5G45430
gma-u.5
for
100784474
gma-u.5
for
100804781
gma-u.5
for
100810150
sly-u.5
for
101245779
sly-u.5
for
101252911
sly-u.5
for
101253697
vvi-u.5
for
100241542
vvi-u.5
for
104882706
ppo-u.5
for
7471169
ppo-u.5
for
7465471
ppo-u.5
for
7462814
mtr-u.5
for
11426323
mtr-u.5
for
11434489
mtr-u.5
for
25501566


Ortholog ID: 1087
Species hvu hvu tae tae bdi bdi osa osa zma zma sbi sbi ath ath gma gma sly sly bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot sot cit nta nta cre
Symbol LOC123395078 LOC123411565 LOC123087636 LOC123128100 LOC100842580 LOC100824159 LOC4334774 LOC4330434 LOC100381504 LOC100272250 LOC8066914 LOC8073873 AT4G19110 AT5G45430 LOC100792842 LOC100810838 LOC101252911 LOC101253697 LOC103827800 LOC104882706 LOC100241542 LOC7471169 LOC7462814 LOC11426323 LOC25501566 LOC107900678 LOC107941383 LOC106419727 LOC125574932 LOC102582273 LOC102582843 LOC102621975 LOC107831043 LOC107792140 CHLRE_16g661100v5
Function* cyclin-dependent kinase F-3 cyclin-dependent kinase F-4-like cyclin-dependent kinase F-3 cyclin-dependent kinase F-4 cyclin-dependent kinase F-4 cyclin-dependent kinase F-3 cyclin-dependent kinase F-3-like cyclin-dependent kinase F-4-like putative protein kinase superfamily protein putative protein kinase superfamily protein cyclin-dependent kinase F-4 cyclin-dependent kinase F-4 Protein kinase superfamily protein Protein kinase superfamily protein serine/threonine-protein kinase MHK cyclin-dependent kinase F-4 cyclin-dependent kinase F-4 serine/threonine-protein kinase MHK cyclin-dependent kinase F-4 cyclin-dependent kinase F-4 serine/threonine-protein kinase MHK serine/threonine-protein kinase MHK cyclin-dependent kinase F-4 cyclin-dependent kinase F-4 cyclin-dependent kinase F-4 cyclin-dependent kinase F-4 cyclin-dependent kinase F-4 cyclin-dependent kinase F-4 cyclin-dependent kinase F-4-like cyclin-dependent kinase F-4-like cyclin-dependent kinase F-4-like serine/threonine-protein kinase MHK serine/threonine-protein kinase MHK cyclin-dependent kinase F-4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 4
tae04145 Phagosome 3
tae04517 IgSF CAM signaling 3
tae04518 Integrin signaling 3
tae04620 Toll-like receptor signaling pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 5
bdi04145 Phagosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath04712 Circadian rhythm - plant 2
ath04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00514 Other types of O-glycan biosynthesis 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123395078 123411565 123087636 123128100 100842580 100824159 4334774 4330434 100381504 100272250 8066914 8073873 827649 834579 100792842 100810838 101252911 101253697 103827800 104882706 100241542 7471169 7462814 11426323 25501566 107900678 107941383 106419727 125574932 102582273 102582843 102621975 107831043 107792140 5723499
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