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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123407379   protein SHORT ROOT IN SALT MEDIUM 1-like 
 osa-u.5   4341311   protein SHORT ROOT IN SALT MEDIUM 1 
 zma-u.5   103639973   protein SHORT ROOT IN SALT MEDIUM 1 
 zma-u.5   103629816   protein SHORT ROOT IN SALT MEDIUM 1 
 ath-u.5   emb1579   ATP/GTP-binding protein family 
 gma-u.5   100790366   protein SHORT ROOT IN SALT MEDIUM 1 
 gma-u.5   100784665   protein SHORT ROOT IN SALT MEDIUM 1 
 sly-u.5   101251176   protein SHORT ROOT IN SALT MEDIUM 1 
 vvi-u.5   100260241   protein SHORT ROOT IN SALT MEDIUM 1 
 ppo-u.5   18102644   protein SHORT ROOT IN SALT MEDIUM 1 
 mtr-u.5   11427762   protein SHORT ROOT IN SALT MEDIUM 1 

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Top 50 coexpressed genes to 123407379 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123407379 (hvu-r.1 coexpression data)

CoexMap"123407379"


hvuLOC123407379 | Entrez gene ID : 123407379    
Species hvu osa zma ath gma sly vvi ppo mtr bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1721 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3241 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (352 genes)  IEA  
Protein XP_044956434.1 [sequence] [blastp]
XP_044956435.1 [sequence] [blastp]
XP_044956436.1 [sequence] [blastp]
XP_044956437.1 [sequence] [blastp]
XP_044956438.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  vacu 1,  pero 1  (predict for XP_044956434.1)
chlo 4,  nucl 4,  vacu 1,  pero 1  (predict for XP_044956435.1)
chlo 4,  nucl 4,  vacu 1,  pero 1  (predict for XP_044956436.1)
chlo 4,  nucl 4,  pero 1  (predict for XP_044956437.1)
chlo 4,  nucl 4,  pero 1  (predict for XP_044956438.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for XP_044956434.1)
other 8,  mito 4  (predict for XP_044956435.1)
other 8,  mito 4  (predict for XP_044956436.1)
other 7,  mito 4  (predict for XP_044956437.1)
other 7,  mito 4  (predict for XP_044956438.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123407379
osa-u.5
for
4341311
zma-u.5
for
103639973
zma-u.5
for
103629816
ath-u.5
for
emb1579
gma-u.5
for
100790366
gma-u.5
for
100784665
sly-u.5
for
101251176
vvi-u.5
for
100260241
ppo-u.5
for
18102644
mtr-u.5
for
11427762


Ortholog ID: 6479
Species hvu hvu tae tae bdi bdi osa zma zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123448844 LOC123407379 LOC123085650 LOC123092378 LOC100829458 LOC100840292 LOC4341311 LOC103639973 LOC103629816 LOC8076726 emb1579 LOC100784665 LOC100790366 LOC101251176 LOC117131712 LOC103839424 LOC100260241 LOC18102644 LOC11427762 LOC121228123 LOC107898725 LOC106393993 LOC106417107 LOC102604348 LOC102607752 LOC107807000 LOC107802770 CHLRE_06g283634v5
Function* protein SHORT ROOT IN SALT MEDIUM 1-like protein SHORT ROOT IN SALT MEDIUM 1-like protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 uncharacterized LOC100829458 cell division cycle and apoptosis regulator protein 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 cell division cycle and apoptosis regulator protein 1 ATP/GTP-binding protein family protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1-like protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1-like protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 cell division cycle and apoptosis regulator protein 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
tae03430 Mismatch repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03040 Spliceosome 2
ath03015 mRNA surveillance pathway 2
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 6
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03018 RNA degradation 2
nta04075 Plant hormone signal transduction 2
nta00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123448844 123407379 123085650 123092378 100829458 100840292 4341311 103639973 103629816 8076726 814844 100784665 100790366 101251176 117131712 103839424 100260241 18102644 11427762 121228123 107898725 106393993 106417107 102604348 102607752 107807000 107802770 66053774
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