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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123442712   putative pentatricopeptide repeat-containing protein At3g15200 
 tae-r.2   123068664   putative pentatricopeptide repeat-containing protein At3g15200 
 tae-r.2   123060170   putative pentatricopeptide repeat-containing protein At3g15200 
 tae-r.2   123077180   putative pentatricopeptide repeat-containing protein At3g15200 
 bdi-r.1   106865383   putative pentatricopeptide repeat-containing protein At3g15200 
 osa-u.5   9270198   putative pentatricopeptide repeat-containing protein At3g15200 
 zma-u.5   100192076   GTP binding protein 
 sbi-r.1   8073298   putative pentatricopeptide repeat-containing protein At3g15200 
 ath-u.5   AT3G15200   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sly-u.5   101263382   putative pentatricopeptide repeat-containing protein At3g15200 
 bra-r.6   103869950   putative pentatricopeptide repeat-containing protein At3g15200 
 vvi-u.5   100252048   putative pentatricopeptide repeat-containing protein At3g15200 
 ppo-u.5   7460803   putative pentatricopeptide repeat-containing protein At3g15200 
 mtr-u.5   25487303   putative pentatricopeptide repeat-containing protein At3g15200 
 mtr-u.5   120578405   putative pentatricopeptide repeat-containing protein At3g15200 
 mtr-u.5   112419510   putative pentatricopeptide repeat-containing protein At3g15200 
 ghi-r.1   107895257   putative pentatricopeptide repeat-containing protein At3g15200 
 ghi-r.1   107918513   putative pentatricopeptide repeat-containing protein At3g15200 
 sot-r.1   102583243   putative pentatricopeptide repeat-containing protein At3g15200 
 cit-r.1   102630881   putative pentatricopeptide repeat-containing protein At3g15200 
 nta-r.1   107805833   putative pentatricopeptide repeat-containing protein At3g15200 
 nta-r.1   107812350   putative pentatricopeptide repeat-containing protein At3g15200 

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Top 50 coexpressed genes to 123442712 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123442712 (hvu-r.1 coexpression data)

CoexMap"123408215"


hvuLOC123408215 | Entrez gene ID : 123408215    
Species hvu tae bdi osa zma sbi ath sly bra vvi ppo mtr ghi sot cit nta gma bna cre
Paralog 1 3 1 1 1 1 1 1 1 1 1 3 2 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0008380 [list] [network] RNA splicing  (216 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044957313.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  extr 1,  E.R. 1  (predict for XP_044957313.1)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for XP_044957313.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123442712
tae-r.2
for
123068664
tae-r.2
for
123060170
tae-r.2
for
123077180
bdi-r.1
for
106865383
osa-u.5
for
9270198
zma-u.5
for
100192076
sbi-r.1
for
8073298
ath-u.5
for
AT3G15200
sly-u.5
for
101263382
bra-r.6
for
103869950
vvi-u.5
for
100252048
ppo-u.5
for
7460803
mtr-u.5
for
25487303
mtr-u.5
for
120578405
mtr-u.5
for
112419510
ghi-r.1
for
107895257
ghi-r.1
for
107918513
sot-r.1
for
102583243
cit-r.1
for
102630881
nta-r.1
for
107805833
nta-r.1
for
107812350


Ortholog ID: 7569
Species hvu tae tae tae bdi osa zma sbi ath sly bra vvi ppo mtr mtr mtr ghi ghi sot cit nta nta
Symbol LOC123442712 LOC123068664 LOC123060170 LOC123077180 LOC106865383 LOC9270198 LOC100192076 LOC8073298 AT3G15200 LOC101263382 LOC103869950 LOC100252048 LOC7460803 LOC25487303 LOC120578405 LOC112419510 LOC107895257 LOC107918513 LOC102583243 LOC102630881 LOC107805833 LOC107812350
Function* putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 GTP binding protein putative pentatricopeptide repeat-containing protein At3g15200 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200 putative pentatricopeptide repeat-containing protein At3g15200
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01250 Biosynthesis of nucleotide sugars 3
hvu00541 Biosynthesis of various nucleotide sugars 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123442712 123068664 123060170 123077180 106865383 9270198 100192076 8073298 820751 101263382 103869950 100252048 7460803 25487303 120578405 112419510 107895257 107918513 102583243 102630881 107805833 107812350
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