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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123401957   uncharacterized LOC123401957 
 hvu-r.1   123401968   uncharacterized LOC123401968 
 tae-r.2   123135441   uncharacterized LOC123135441 
 bdi-r.1   112268504   transcription termination factor MTEF1, chloroplastic-like 
 bdi-r.1   104583401   uncharacterized LOC104583401 
 osa-u.5   9267605   transcription termination factor MTERF8, chloroplastic 
 osa-u.5   9266609   transcription termination factor MTERF4, chloroplastic 
 osa-u.5   4340542   transcription termination factor MTERF9, chloroplastic 
 zma-u.5   100285792   uncharacterized LOC100285792 
 zma-u.5   100275501   uncharacterized LOC100275501 
 zma-u.5   100193389   uncharacterized LOC100193389 
 sbi-r.1   8066427   transcription termination factor MTERF2, chloroplastic 
 sbi-r.1   8066425   transcription termination factor MTERF2, chloroplastic 
 sbi-r.1   8071051   transcription termination factor MTERF15, mitochondrial 
 ath-u.5   AT5G07900   Mitochondrial transcription termination factor family protein 
 ath-u.5   AT5G64950   Mitochondrial transcription termination factor family protein 
 ath-u.5   AT1G21150   Mitochondrial transcription termination factor family protein 
 gma-u.5   100806920   transcription termination factor MTERF15, mitochondrial 
 gma-u.5   100813396   transcription termination factor MTERF15, mitochondrial 
 gma-u.5   106799612   uncharacterized LOC106799612 
 sly-u.5   101253358   transcription termination factor MTERF5, chloroplastic 
 sly-u.5   101267803   uncharacterized LOC101267803 
 sly-u.5   101266934   uncharacterized LOC101266934 
 bra-r.6   103858260   transcription termination factor MTERF8, chloroplastic 
 bra-r.6   103862768   uncharacterized LOC103862768 
 vvi-u.5   100251002   uncharacterized LOC100251002 
 vvi-u.5   100245862   transcription termination factor MTERF5, chloroplastic 
 ppo-u.5   7462813   transcription termination factor MTERF4, chloroplastic 
 ppo-u.5   7455788   transcription termination factor MTERF9, chloroplastic 
 ppo-u.5   7476812   uncharacterized LOC7476812 
 mtr-u.5   25501781   transcription termination factor MTERF5, chloroplastic 
 mtr-u.5   11446118   uncharacterized LOC11446118 
 mtr-u.5   25490579   uncharacterized LOC25490579 
 ghi-r.1   107920427   transcription termination factor MTERF5, chloroplastic 
 ghi-r.1   121204522   transcription termination factor MTERF8, chloroplastic 
 ghi-r.1   107947393   uncharacterized LOC107947393 
 bna-r.1   106444884   uncharacterized LOC106444884 
 bna-r.1   BNAC03G44350D   transcription termination factor MTERF8, chloroplastic 
 bna-r.1   BNAC01G30050D   transcription termination factor MTERF2, chloroplastic 
 sot-r.1   102580515   uncharacterized LOC102580515 
 sot-r.1   102587512   uncharacterized LOC102587512 
 sot-r.1   102602747   uncharacterized LOC102602747 
 cit-r.1   127900674   transcription termination factor MTERF15, mitochondrial-like 
 cit-r.1   102611574   transcription termination factor MTERF5, chloroplastic-like 
 nta-r.1   107791225   uncharacterized LOC107791225 
 nta-r.1   107782572   uncharacterized LOC107782572 

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Top 50 coexpressed genes to 123401957 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123401957 (hvu-r.1 coexpression data)

CoexMap"123408415"


hvuLOC123408415 | Entrez gene ID : 123408415    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 2 3 3 3 3 3 3 2 2 3 3 3 3 3 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (92 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1721 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (755 genes)  IEA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (504 genes)  IEA  
Protein XP_044957464.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4  (predict for XP_044957464.1)
Subcellular
localization
TargetP
mito 7,  chlo 4  (predict for XP_044957464.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123401957
hvu-r.1
for
123401968
tae-r.2
for
123135441
bdi-r.1
for
112268504
bdi-r.1
for
104583401
osa-u.5
for
9267605
osa-u.5
for
9266609
osa-u.5
for
4340542
zma-u.5
for
100285792
zma-u.5
for
100275501
zma-u.5
for
100193389
sbi-r.1
for
8066427
sbi-r.1
for
8066425
sbi-r.1
for
8071051
ath-u.5
for
AT5G07900
ath-u.5
for
AT5G64950
ath-u.5
for
AT1G21150
gma-u.5
for
100806920
gma-u.5
for
100813396
gma-u.5
for
106799612
sly-u.5
for
101253358
sly-u.5
for
101267803
sly-u.5
for
101266934
bra-r.6
for
103858260
bra-r.6
for
103862768
vvi-u.5
for
100251002
vvi-u.5
for
100245862
ppo-u.5
for
7462813
ppo-u.5
for
7455788
ppo-u.5
for
7476812
mtr-u.5
for
25501781
mtr-u.5
for
11446118
mtr-u.5
for
25490579
ghi-r.1
for
107920427
ghi-r.1
for
121204522
ghi-r.1
for
107947393
bna-r.1
for
106444884
bna-r.1
for
BNAC03G44350D
bna-r.1
for
BNAC01G30050D
sot-r.1
for
102580515
sot-r.1
for
102587512
sot-r.1
for
102602747
cit-r.1
for
127900674
cit-r.1
for
102611574
nta-r.1
for
107791225
nta-r.1
for
107782572


Ortholog ID: 37
Species hvu hvu tae tae tae bdi bdi osa osa zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly sly bra bra vvi vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta
Symbol LOC123401732 LOC123411721 LOC123080704 LOC123145473 LOC123145472 LOC100837156 LOC100840205 LOC4343048 LOC4338741 LOC100193811 LOC100285204 LOC100284682 LOC8062993 LOC8057353 LOC8057363 AT5G07900 AT5G64950 AT1G21150 LOC100806920 LOC106796317 LOC102661687 LOC101267803 LOC101258025 LOC101268097 LOC103858260 LOC103862768 LOC100246295 LOC100258309 LOC100241175 LOC18111233 LOC18094344 LOC11422280 LOC25494089 LOC25501780 LOC121204522 LOC107916058 LOC107931417 BNAC03G44350D LOC106365769 LOC106418515 LOC102588163 LOC102585626 LOC102589966 LOC127900674 LOC102622219 LOC102619962 LOC107777294 LOC107759636 LOC107826212
Function* transcription termination factor MTERF8, chloroplastic-like uncharacterized LOC123411721 uncharacterized LOC123080704 transcription termination factor MTERF8, chloroplastic uncharacterized LOC123145472 uncharacterized LOC100837156 uncharacterized LOC100840205 transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF4, chloroplastic uncharacterized LOC100193811 uncharacterized LOC100285204 uncharacterized LOC100284682 uncharacterized LOC8062993 transcription termination factor MTEF1, chloroplastic uncharacterized LOC8057363 Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family protein transcription termination factor MTERF15, mitochondrial uncharacterized LOC106796317 uncharacterized LOC102661687 uncharacterized LOC101267803 transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF8, chloroplastic uncharacterized LOC103862768 uncharacterized LOC100246295 transcription termination factor MTERF15, mitochondrial transcription termination factor MTERF9, chloroplastic-like uncharacterized LOC18111233 transcription termination factor MTERF9, chloroplastic uncharacterized LOC11422280 uncharacterized LOC25494089 uncharacterized LOC25501780 transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF6, chloroplastic/mitochondrial uncharacterized LOC107931417 transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF4, chloroplastic-like transcription termination factor MTERF2, chloroplastic-like uncharacterized LOC102588163 uncharacterized LOC102585626 uncharacterized LOC102589966 transcription termination factor MTERF15, mitochondrial-like uncharacterized LOC102622219 transcription termination factor MTERF2, chloroplastic-like transcription termination factor MTERF15, mitochondrial-like transcription termination factor MTERF8, chloroplastic-like transcription termination factor MTERF8, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 3
gma01212 Fatty acid metabolism 3
gma00620 Pyruvate metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly04382 Cornified envelope formation 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00190 Oxidative phosphorylation 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00860 Porphyrin metabolism 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 5
sot00280 Valine, leucine and isoleucine degradation 2
sot00270 Cysteine and methionine metabolism 2
sot00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123401732 123411721 123080704 123145473 123145472 100837156 100840205 4343048 4338741 100193811 100285204 100284682 8062993 8057353 8057363 830684 836619 838711 100806920 106796317 102661687 101267803 101258025 101268097 103858260 103862768 100246295 100258309 100241175 18111233 18094344 11422280 25494089 25501780 121204522 107916058 107931417 106434119 106365769 106418515 102588163 102585626 102589966 127900674 102622219 102619962 107777294 107759636 107826212
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