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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123411449   E3 ubiquitin-protein ligase SHPRH-like 
 hvu-r.1   123424704   E3 ubiquitin-protein ligase SHPRH-like 
 tae-r.2   123051548   E3 ubiquitin-protein ligase SHPRH 
 tae-r.2   123043678   E3 ubiquitin-protein ligase SHPRH 
 tae-r.2   123187471   E3 ubiquitin-protein ligase SHPRH 
 bdi-r.1   100827745   E3 ubiquitin-protein ligase SHPRH 
 osa-u.5   4344297   uncharacterized LOC4344297 
 zma-u.5   103633565   E3 ubiquitin-protein ligase SHPRH 
 sbi-r.1   8074455   E3 ubiquitin-protein ligase SHPRH 
 ath-u.5   AT2G40770   RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein 
 gma-u.5   100776659   E3 ubiquitin-protein ligase SHPRH 
 sly-u.5   101254366   uncharacterized LOC101254366 
 bra-r.6   103865835   E3 ubiquitin-protein ligase SHPRH 
 vvi-u.5   100248506   uncharacterized LOC100248506 
 ppo-u.5   18108340   uncharacterized LOC18108340 
 mtr-u.5   11410582   E3 ubiquitin-protein ligase SHPRH 
 ghi-r.1   107916261   E3 ubiquitin-protein ligase SHPRH 
 ghi-r.1   107896570   E3 ubiquitin-protein ligase SHPRH 
 bna-r.1   106391618   E3 ubiquitin-protein ligase SHPRH 
 bna-r.1   106347815   E3 ubiquitin-protein ligase SHPRH-like 
 sot-r.1   102582668   E3 ubiquitin-protein ligase SHPRH 
 cit-r.1   102630976   uncharacterized LOC102630976 
 nta-r.1   107802983   uncharacterized LOC107802983 
 nta-r.1   107776915   uncharacterized LOC107776915 
 cre-r.1   CHLRE_06g304000v5   uncharacterized protein 
 cre-r.1   CHLRE_13g603400v5   uncharacterized protein 

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Top 50 coexpressed genes to 123411449 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123411449 (hvu-r.1 coexpression data)

CoexMap"123411449"


hvuLOC123411449 | Entrez gene ID : 123411449    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (49 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2546 genes)  IEA  
Protein XP_044960330.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 2,  cyto_mito 1,  nucl 1  (predict for XP_044960330.1)
Subcellular
localization
TargetP
mito 4,  chlo 4  (predict for XP_044960330.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123411449
hvu-r.1
for
123424704
tae-r.2
for
123051548
tae-r.2
for
123043678
tae-r.2
for
123187471
bdi-r.1
for
100827745
osa-u.5
for
4344297
zma-u.5
for
103633565
sbi-r.1
for
8074455
ath-u.5
for
AT2G40770
gma-u.5
for
100776659
sly-u.5
for
101254366
bra-r.6
for
103865835
vvi-u.5
for
100248506
ppo-u.5
for
18108340
mtr-u.5
for
11410582
ghi-r.1
for
107916261
ghi-r.1
for
107896570
bna-r.1
for
106391618
bna-r.1
for
106347815
sot-r.1
for
102582668
cit-r.1
for
102630976
nta-r.1
for
107802983
nta-r.1
for
107776915
cre-r.1
for
CHLRE_06g304000v5
cre-r.1
for
CHLRE_13g603400v5


Ortholog ID: 8421
Species hvu hvu tae tae tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre cre
Symbol LOC123411449 LOC123424704 LOC123051548 LOC123043678 LOC123187471 LOC100827745 LOC4344297 LOC103633565 LOC8074455 AT2G40770 LOC100776659 LOC101254366 LOC103865835 LOC100248506 LOC18108340 LOC11410582 LOC107916261 LOC107896570 LOC106391618 LOC106347815 LOC102582668 LOC102630976 LOC107802983 LOC107776915 CHLRE_06g304000v5 CHLRE_13g603400v5
Function* E3 ubiquitin-protein ligase SHPRH-like E3 ubiquitin-protein ligase SHPRH-like E3 ubiquitin-protein ligase SHPRH E3 ubiquitin-protein ligase SHPRH E3 ubiquitin-protein ligase SHPRH E3 ubiquitin-protein ligase SHPRH uncharacterized LOC4344297 E3 ubiquitin-protein ligase SHPRH E3 ubiquitin-protein ligase SHPRH RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein E3 ubiquitin-protein ligase SHPRH uncharacterized LOC101254366 E3 ubiquitin-protein ligase SHPRH uncharacterized LOC100248506 uncharacterized LOC18108340 E3 ubiquitin-protein ligase SHPRH E3 ubiquitin-protein ligase SHPRH E3 ubiquitin-protein ligase SHPRH E3 ubiquitin-protein ligase SHPRH E3 ubiquitin-protein ligase SHPRH-like E3 ubiquitin-protein ligase SHPRH uncharacterized LOC102630976 uncharacterized LOC107802983 uncharacterized LOC107776915 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00071 Fatty acid degradation 4
tae01212 Fatty acid metabolism 4
tae00280 Valine, leucine and isoleucine degradation 3
tae00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03082 ATP-dependent chromatin remodeling 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 3
ath03250 Viral life cycle - HIV-1 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00564 Glycerophospholipid metabolism 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00232 Caffeine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00232 Caffeine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 4
bna02010 ABC transporters 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 4
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta03082 ATP-dependent chromatin remodeling 2
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123411449 123424704 123051548 123043678 123187471 100827745 4344297 103633565 8074455 818674 100776659 101254366 103865835 100248506 18108340 11410582 107916261 107896570 106391618 106347815 102582668 102630976 107802983 107776915 5716918 5724666
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