ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123413247	protein SRG1-like
hvu-r.1	123404491	protein SRG1-like
hvu-r.1	123404490	protein SRG1-like
tae-r.2	123146035	protein SRG1
bdi-r.1	100833979	protein SRG1
bdi-r.1	100834695	protein SRG1
osa-u.5	9270348	protein SRG1
osa-u.5	9272431	protein LATERAL BRANCHING OXIDOREDUCTASE 1
zma-u.5	100285776	leucoanthocyanidin dioxygenase
zma-u.5	100281145	uncharacterized LOC100281145
sbi-r.1	8070223	protein SRG1
sbi-r.1	8076189	codeine O-demethylase
sbi-r.1	8076185	protein SRG1
ath-u.5	AT5G20400	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
ath-u.5	AT5G20550	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
gma-u.5	100793145	codeine O-demethylase-like
gma-u.5	100802232	codeine O-demethylase
gma-u.5	100799195	codeine O-demethylase-like
sly-u.5	101252129	protein LATERAL BRANCHING OXIDOREDUCTASE 1
sly-u.5	101258320	protein LATERAL BRANCHING OXIDOREDUCTASE 1
sly-u.5	101245777	protein LATERAL BRANCHING OXIDOREDUCTASE 1-like
bra-r.6	103845680	codeine O-demethylase
bra-r.6	103856445	flavonol synthase/flavanone 3-hydroxylase
bra-r.6	103851996	protein SRG1
vvi-u.5	100247195	protein SRG1
vvi-u.5	100242056	protein SRG1
vvi-u.5	100250663	protein SRG1-like
ppo-u.5	7480507	protein SRG1
mtr-u.5	11443553	protein SRG1
mtr-u.5	11446682	protein SRG1
mtr-u.5	25490337	codeine O-demethylase
ghi-r.1	107905275	protein SRG1
bna-r.1	106385743	protein SRG1-like
bna-r.1	111213584	protein SRG1-like
bna-r.1	106371756	codeine O-demethylase-like
sot-r.1	102601412	protein SRG1-like
sot-r.1	102588798	codeine O-demethylase-like
cit-r.1	102631277	codeine O-demethylase-like
cit-r.1	102628927	flavonol synthase 1-like
cit-r.1	102624868	protein SRG1-like
nta-r.1	107789723	protein LATERAL BRANCHING OXIDOREDUCTASE 1
nta-r.1	107784809	protein LATERAL BRANCHING OXIDOREDUCTASE 1

Top 50 coexpressed genes to 123413247 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123413247 (hvu-r.1 coexpression data)

CoexMap"123413247"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044962123.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 1, nucl 1, cysk 1, golg 1, chlo_mito 1, nucl_plas 1

(predict for XP_044962123.1)

Subcellular
localization
TargetP

other 6

(predict for XP_044962123.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123413247	hvu-r.1 for 123404491	hvu-r.1 for 123404490	tae-r.2 for 123146035	bdi-r.1 for 100833979	bdi-r.1 for 100834695	osa-u.5 for 9270348	osa-u.5 for 9272431	zma-u.5 for 100285776	zma-u.5 for 100281145	sbi-r.1 for 8070223	sbi-r.1 for 8076189	sbi-r.1 for 8076185	ath-u.5 for AT5G20400	ath-u.5 for AT5G20550	gma-u.5 for 100793145	gma-u.5 for 100802232	gma-u.5 for 100799195	sly-u.5 for 101252129	sly-u.5 for 101258320	sly-u.5 for 101245777	bra-r.6 for 103845680	bra-r.6 for 103856445	bra-r.6 for 103851996	vvi-u.5 for 100247195	vvi-u.5 for 100242056	vvi-u.5 for 100250663	ppo-u.5 for 7480507	mtr-u.5 for 11443553	mtr-u.5 for 11446682	mtr-u.5 for 25490337	ghi-r.1 for 107905275	bna-r.1 for 106385743	bna-r.1 for 111213584	bna-r.1 for 106371756	sot-r.1 for 102601412	sot-r.1 for 102588798	cit-r.1 for 102631277	cit-r.1 for 102628927	cit-r.1 for 102624868	nta-r.1 for 107789723	nta-r.1 for 107784809

Ortholog

Ortholog ID: 469

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

codeine O-demethylase-like

protein SRG1-like

2-oxoglutarate-dependent dioxygenase 11-like

protein SRG1

protein SRG1-like

protein LATERAL BRANCHING OXIDOREDUCTASE 1

protein SRG1

protein LATERAL BRANCHING OXIDOREDUCTASE 1

leucoanthocyanidin dioxygenase

uncharacterized LOC100281145

protein SRG1

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

codeine O-demethylase-like

codeine O-demethylase

codeine O-demethylase-like

protein LATERAL BRANCHING OXIDOREDUCTASE 1

protein SRG1-like

codeine O-demethylase

flavonol synthase/flavanone 3-hydroxylase

protein SRG1

protein SRG1-like

protein SRG1

codeine O-demethylase

2-oxoglutarate-dependent dioxygenase 11

protein SRG1

protein SRG1-like

codeine O-demethylase-like

protein SRG1-like

flavonol synthase 1-like

protein SRG1-like

protein LATERAL BRANCHING OXIDOREDUCTASE 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00670	One carbon pool by folate	3
hvu04981	Folate transport and metabolism	2
hvu00230	Purine metabolism	2
hvu01232	Nucleotide metabolism	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00480	Glutathione metabolism	6
hvu00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2
zma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	2
gma00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00941	Flavonoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00230	Purine metabolism	2
sly00232	Caffeine metabolism	2
sly01232	Nucleotide metabolism	2
sly04146	Peroxisome	2
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00620	Pyruvate metabolism	2
sly00640	Propanoate metabolism	2
sly01200	Carbon metabolism	2
sly00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00270	Cysteine and methionine metabolism	3
bra00543	Exopolysaccharide biosynthesis	2
bra00920	Sulfur metabolism	2
bra01200	Carbon metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00460	Cyanoamino acid metabolism	4
vvi00310	Lysine degradation	2
vvi00071	Fatty acid degradation	2
vvi00280	Valine, leucine and isoleucine degradation	2
vvi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	5
vvi01200	Carbon metabolism	3
vvi01230	Biosynthesis of amino acids	3
vvi00051	Fructose and mannose metabolism	3
vvi00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00061	Fatty acid biosynthesis	2
mtr00071	Fatty acid degradation	2
mtr01212	Fatty acid metabolism	2
mtr04146	Peroxisome	2
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00902	Monoterpenoid biosynthesis	3
mtr00500	Starch and sucrose metabolism	3
mtr00520	Amino sugar and nucleotide sugar metabolism	2
mtr01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00908	Zeatin biosynthesis	3
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04122	Sulfur relay system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	4
sot04626	Plant-pathogen interaction	4
sot00010	Glycolysis / Gluconeogenesis	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00071	Fatty acid degradation	5
sot01212	Fatty acid metabolism	5
sot01200	Carbon metabolism	4
sot00592	alpha-Linolenic acid metabolism	4
sot04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01240	Biosynthesis of cofactors	6
cit00130	Ubiquinone and other terpenoid-quinone biosynthesis	4
cit01230	Biosynthesis of amino acids	4
cit00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	2
cit00230	Purine metabolism	2
cit00330	Arginine and proline metabolism	2
cit00360	Phenylalanine metabolism	2
cit00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	2
nta04146	Peroxisome	2

Expression

Expression pattern

Entrez Gene ID^*

123413248

123398224

123163650

100834695

100835002

9266216

4329022

4340290

100285776

100281145

8070223

8067657

832162

841362

100793145

100802232

100799195

101252129

101261126

103845680

103856445

103851996

100242056

100250663

100249729

11443553

11418222

11438671

107905275

106385743

111213584

106439500

102588798

107062634

102601070

102628927

102624868

107789723

107784809

The preparation time of this page was 0.2 [sec].


Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	2	2	2	3	2	3	3	3	3	1	3	1	3	2	3	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123413247 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123413247 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**