ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123413582	transcription initiation factor TFIID subunit 5
osa-u.5	4341679	transcription initiation factor TFIID subunit 5
osa-u.5	4342682	transcription initiation factor TFIID subunit 5
zma-u.5	103642689	transcription initiation factor TFIID subunit 5
zma-u.5	103630828	transcription initiation factor TFIID subunit 5
zma-u.5	100501797	uncharacterized LOC100501797
ath-u.5	TAF5	TBP-associated factor 5
gma-u.5	100805953	transcription initiation factor TFIID subunit 5
gma-u.5	100790500	transcription initiation factor TFIID subunit 5
gma-u.5	100781563	transcription initiation factor TFIID subunit 5
sly-u.5	101268876	transcription initiation factor TFIID subunit 5
vvi-u.5	100254222	transcription initiation factor TFIID subunit 5
ppo-u.5	7489149	transcription initiation factor TFIID subunit 5
ppo-u.5	7465413	transcription initiation factor TFIID subunit 5
mtr-u.5	11425826	transcription initiation factor TFIID subunit 5

Annotation

functional annotation

KEGG

hvg03022 [list] [network] Basal transcription factors (65 genes)

GO BP

GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter

(47 genes)

IEA

GO CC

GO:0005669 [list] [network] transcription factor TFIID complex

(23 genes)

IEA

GO MF

GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity	(28 genes)	IEA
GO:0005515 [list] [network] protein binding	(4692 genes)	IEA

Protein

XP_044962450.1 [sequence] [blastp]
XP_044962452.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 1, mito 1, vacu 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_044962450.1)
nucl 7, cyto 1, mito 1, vacu 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_044962452.1)

Subcellular
localization
TargetP

other 7	(predict for XP_044962450.1)
other 7	(predict for XP_044962452.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123413582	osa-u.5 for 4341679	osa-u.5 for 4342682	zma-u.5 for 103642689	zma-u.5 for 103630828	zma-u.5 for 100501797	ath-u.5 for TAF5	gma-u.5 for 100805953	gma-u.5 for 100790500	gma-u.5 for 100781563	sly-u.5 for 101268876	vvi-u.5 for 100254222	ppo-u.5 for 7489149	ppo-u.5 for 7465413	mtr-u.5 for 11425826

Ortholog

Ortholog ID: 5378

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

TAF5

Function^*

transcription initiation factor TFIID subunit 5

uncharacterized LOC100501797

transcription initiation factor TFIID subunit 5

TBP-associated factor 5

transcription initiation factor TFIID subunit 5

transcription initiation factor TFIID subunit 5-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03018	RNA degradation	2
hvu03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4
tae03022	Basal transcription factors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	3
sly03018	RNA degradation	2
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03022	Basal transcription factors	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3
vvi03022	Basal transcription factors	2
vvi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03083	Polycomb repressive complex	2
ppo04136	Autophagy - other	2
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	4
mtr03083	Polycomb repressive complex	4
mtr03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	6
ghi03022	Basal transcription factors	3
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	6
ghi03022	Basal transcription factors	3
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03020	RNA polymerase	2
nta03015	mRNA surveillance pathway	2
nta04382	Cornified envelope formation	2
nta03022	Basal transcription factors	2
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03020	RNA polymerase	2
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	5
cre03020	RNA polymerase	4
cre03420	Nucleotide excision repair	4

Expression

Expression pattern

Entrez Gene ID^*

123413582

123104518

100837458

4342682

4341679

100501797

103642689

110431215

832586

100805953

100790500

101268876

103837080

103854775

100254222

7489149

7465413

11425826

107953742

121219257

106382625

106365993

102605539

102624994

107830809

107829673

5722474

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123413582 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123413582 (hvu-r.1 coexpression data)


Species	hvu	osa	zma	ath	gma	sly	vvi	ppo	mtr	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	3	1	3	1	1	2	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123413582 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123413582 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**