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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123425351   DNA mismatch repair protein MSH4 
 tae-r.2   123052118   peroxisome biogenesis factor 10 
 tae-r.2   123044238   DNA mismatch repair protein MSH4 
 tae-r.2   123187979   DNA mismatch repair protein MSH4 
 bdi-r.1   100822001   DNA mismatch repair protein MSH4 
 osa-u.5   9266513   DNA mismatch repair protein MSH4 
 zma-u.5   103647676   DNA mismatch repair protein MSH4 
 gma-u.5   100815919   DNA mismatch repair protein MSH4 
 sly-u.5   101263336   DNA mismatch repair protein MSH4 
 bra-r.6   103834012   DNA mismatch repair protein MSH4 
 mtr-u.5   11436948   DNA mismatch repair protein MSH4 
 ghi-r.1   107944387   DNA mismatch repair protein MSH4 
 ghi-r.1   107886066   DNA mismatch repair protein MSH4 
 bna-r.1   106381657   DNA mismatch repair protein MSH4 
 bna-r.1   106430357   DNA mismatch repair protein MSH4 
 sot-r.1   102599967   DNA mismatch repair protein MSH4 
 cit-r.1   102623441   DNA mismatch repair protein MSH4 
 nta-r.1   107788296   DNA mismatch repair protein MSH4-like 
 nta-r.1   107802422   DNA mismatch repair protein MSH4 
 cre-r.1   CHLRE_16g692550v5   uncharacterized protein 

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Top 50 coexpressed genes to 123425351 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123425351 (hvu-r.1 coexpression data)

CoexMap"123425351"


hvuLOC123425351 | Entrez gene ID : 123425351    
Species hvu tae bdi osa zma gma sly bra mtr ghi bna sot cit nta cre vvi ppo ath sbi
Paralog 1 3 1 1 1 1 1 1 1 2 2 1 1 2 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006298 [list] [network] mismatch repair  (37 genes)  IEA  
GO:0007131 [list] [network] reciprocal meiotic recombination  (40 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3241 genes)  IEA  
GO MF
GO:0030983 [list] [network] mismatched DNA binding  (16 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (40 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2546 genes)  IEA  
Protein XP_044964970.1 [sequence] [blastp]
XP_044964971.1 [sequence] [blastp]
XP_044964972.1 [sequence] [blastp]
XP_044964973.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_044964970.1)
plas 5,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_044964971.1)
plas 5,  nucl 1,  E.R. 1,  chlo 1,  cyto 1,  vacu 1,  cysk_nucl 1  (predict for XP_044964972.1)
plas 4,  cyto 2,  golg_plas 2,  cysk_plas 2,  mito_plas 2  (predict for XP_044964973.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044964970.1)
other 8  (predict for XP_044964971.1)
other 8  (predict for XP_044964972.1)
other 8  (predict for XP_044964973.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123425351
tae-r.2
for
123052118
tae-r.2
for
123044238
tae-r.2
for
123187979
bdi-r.1
for
100822001
osa-u.5
for
9266513
zma-u.5
for
103647676
gma-u.5
for
100815919
sly-u.5
for
101263336
bra-r.6
for
103834012
mtr-u.5
for
11436948
ghi-r.1
for
107944387
ghi-r.1
for
107886066
bna-r.1
for
106381657
bna-r.1
for
106430357
sot-r.1
for
102599967
cit-r.1
for
102623441
nta-r.1
for
107788296
nta-r.1
for
107802422
cre-r.1
for
CHLRE_16g692550v5


Ortholog ID: 10192
Species hvu tae tae tae bdi osa zma gma sly bra mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123425351 LOC123052118 LOC123044238 LOC123187979 LOC100822001 LOC9266513 LOC103647676 LOC100815919 LOC101263336 LOC103834012 LOC11436948 LOC107944387 LOC107886066 LOC106381657 LOC106430357 LOC102599967 LOC102623441 LOC107788296 LOC107802422 CHLRE_16g692550v5
Function* DNA mismatch repair protein MSH4 peroxisome biogenesis factor 10 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4-like DNA mismatch repair protein MSH4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03040 Spliceosome 3
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03430 Mismatch repair 2
gma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi04144 Endocytosis 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi04144 Endocytosis 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 3
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00561 Glycerolipid metabolism 2
cit00740 Riboflavin metabolism 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta00260 Glycine, serine and threonine metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123425351 123052118 123044238 123187979 100822001 9266513 103647676 100815919 101263336 103834012 11436948 107944387 107886066 106381657 106430357 102599967 102623441 107788296 107802422 5724848
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